Hi,
I fixed Bug#1125648 in version 5.20.5+dfsg-2 of the libsbml package. The
bug was caused by the erroneous setting of the CMAKE_INSTALL_LIBDIR CMake
variable at the configuration step.
A new upstream version (5.21.0) of libsbml is available. I did not check
to see if this version fixes the issue.
My fix in debian/rules addresses the symptom instead of curing the
disease, and will need to be removed at some point in the future.
Best,
Rafael
* Debian Bug Tracking System <[email protected]> [2026-02-08 20:57]:
Your message dated Sun, 08 Feb 2026 20:54:25 +0000
with message-id <[email protected]>
and subject line Bug#1125648: fixed in libsbml 5.20.5+dfsg-2
has caused the Debian Bug report #1125648,
regarding libsbml: FTBFS: dpkg-shlibdeps: error: cannot read /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex: No such file or directory
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1125648: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1125648
Debian Bug Tracking System
Contact [email protected] with problems
From: Santiago Vila <[email protected]>
Subject: libsbml: FTBFS: dpkg-shlibdeps: error: cannot read
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex: No such file
or directory
Date: Thu, 15 Jan 2026 16:54:18 +0000
To: Debian BTS <[email protected]>
Message-Id: <[email protected]>
Package: src:libsbml
Version: 5.20.5+dfsg-1
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build.
Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:
https://people.debian.org/~sanvila/build-logs/202601/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:libsbml, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --builddir=build --buildsystem=cmake --without autoreconf --no-parallel
dh_auto_clean -O--builddir=build -O--buildsystem=cmake -O--no-parallel
debian/rules execute_after_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
### the clean target of the libsbml makefile is highly b0rken ###
### the switch to cmake didn't result in great approvements ###
### still inline changes of files ###
### very ugly ###
rm -rf build docs/formatted docs/src/doxygen-version-specific.txt
docs/src/doxygen-config-cpp.txt \
docs/src/doxygen-config-csharp.txt docs/src/doxygen-config-perl.txt
docs/src/doxygen-config-python.txt \
docs/src/java-substitutions/libsbmlConstants.java
docs/src/libsbml-installation.html docs/src/perlmod/DoxyDocs.pm \
docs/src/perlmod/DoxyStructure.pm docs/src/perlmod/Makefile
docs/src/perlmod/doxyrules.make \
src/bindings/matlab/runTests.log docs/src/doxygen-config-c.txt
src/bindings/matlab/*.mex* docs/src/perlmod \
docs/src/doxygen_sqlite3.db docs/src/libsbml.py
docs/src/common-text/libsbml-version.html
[... snipped ...]
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L2v2CompatibilityValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L2v3CompatibilityValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L2v4CompatibilityValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L3v1CompatibilityValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/L3v2CompatibilityValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/MathMLConsistencyValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/ModelingPracticeValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/OverdeterminedValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBMLExternalValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBMLInternalValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBMLValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/SBOConsistencyValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/StrictUnitConsistencyValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/UnitConsistencyValidator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/VConstraint.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/validator/Validator.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/ExpatAttributes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/ExpatHandler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/ExpatParser.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLAttributes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLHandler.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLNamespaces.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLParser.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/LibXMLTranscode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLAttributes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLBuffer.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLConstructorException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLError.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLErrorLog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLExtern.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLFileBuffer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLHandler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLInputStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLLogOverride.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLMemoryBuffer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLNamespaces.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLNode.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLOutputStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLToken.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLTokenizer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XMLTriple.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesAttributes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesHandler.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesNamespaces.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesParser.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/xml/XercesTranscode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/AlgebraicRule.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/AssignmentRule.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Compartment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/CompartmentType.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Constraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Delay.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Event.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/EventAssignment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/ExpectedAttributes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/FunctionDefinition.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/InitialAssignment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/KineticLaw.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/ListOf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/LocalParameter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Model.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/ModifierSpeciesReference.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Parameter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Priority.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/RateRule.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Reaction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Rule.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLConstructorException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLDocument.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLError.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLErrorLog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLErrorTable.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLNamespaces.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLTypeCodes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLTypes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLVisitor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBMLWriter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBO.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SBase.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SimpleSpeciesReference.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Species.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SpeciesReference.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SpeciesType.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/StoichiometryMath.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/SyntaxChecker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Trigger.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/Unit.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/UnitDefinition.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/UnitKind.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-config-common.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-config-packages.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-namespace.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-package.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/common/libsbml-version.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/include/sbml/extension/RegisterExtensions.h
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml.so.5.20.5
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml.so.5
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml.so
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-targets.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-targets-none.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-config-version.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-config.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbml-static.a
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-targets.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-targets-none.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-config-version.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/sbml-static-config.cmake
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/libsbmlj.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/java/libsbmlj.jar
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/x86_64-linux-gnu/perl5/5.40/LibSBML.pod
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/x86_64-linux-gnu/perl5/5.40/LibSBML.pm
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/x86_64-linux-gnu/perl5/5.40/auto/LibSBML/LibSBML.so
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/TranslateSBML.mex
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/OutputSBML.mex
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/addLevelVersion.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/applyUserValidation.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/CheckAndConvert.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/Contents.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/ConvertFormulaToMathML.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getDefaultValues.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getSBMLDefaultStruct.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getStructure.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getStructureEnum.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getStructureFieldnames.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/getValueType.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/installSBML.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isEnabled.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isFbcEnabled.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isoctave.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/isSBML_Model.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/OutputSBML.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/TranslateSBML.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/compareFiles.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/runTests.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testBinding.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testCVTerms.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testGetSBMLDefaultStruct.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testIsSBMLModel.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testMissingOutput.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testOutput.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFlags.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile1.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile10.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile11.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile12.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile13.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile14.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile15.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile16.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile2.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile3.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile4.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile5.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile6.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile7.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile8.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFile9.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc1.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc2.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc3.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFromFileFbc4.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadWriteGeneProductIds.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadWriteGeneProducts.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testReadFbcKeyValuePair.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testAddKeyValuePairs.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/testVersionInformation.m
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/algebraicRules.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/both.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/convertedFormulas.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/convertedFormulas2.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/convertedFormulasL2.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/createdAnnotation.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/createdAnnotationL2.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolAvogadro.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolDelay.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolTime-reaction-l2.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/csymbolTime.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/errors.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fatal.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcL3V2V1.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcL3V2V2.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV2.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV2Labels.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_groups.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_qual.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_qual_groups.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV3.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbcV3_1.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/fbc_kvp.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/funcDefsWithInitialAssignments.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/functionDefinition.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/groups-example1.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/groups_qual.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/initialAssignments.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-branch.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-minimal.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-rules.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1-units.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v1.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l1v2-all.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v1-all.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v1-allelements.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v1-assignment.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v2-all.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v2-newComponents.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v2-newelements.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v3-all.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v3-newelements.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v3-newMath.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v4-all.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l2v5-all.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v1core.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-empty-event.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-empty-math.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-newmath.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2-no-model.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/l3v2core.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/math_no_arguments.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/missing_out.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/nestedPiecewise.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/none.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/nonLogicals.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/notes_annotations.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP00.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP01.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP10.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/outGP11.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/piecewise.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/qual.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/rateRules.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/readerror.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/sparseStoichiometry.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/species.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/test-greek.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/test/test-data/warn.xml
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/python3.13/site-packages/libsbml/_libsbml.so
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/python3.13/site-packages/libsbml.pth
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/python3.13/site-packages/libsbml/libsbml.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs
-- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs
-- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs
-- Up-to-date: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbmldocs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/COPYING.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/FUNDING.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/LICENSE.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/NEWS.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/VERSION.txt
-- Installing:
/<<PKGBUILDDIR>>/debian/tmp/<<PKGBUILDDIR>>/build/lib/x86_64-linux-gnu/pkgconfig/libsbml.pc
make[1]: Leaving directory '/<<PKGBUILDDIR>>/build'
debian/rules execute_after_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/docs/
sed 's#formatted/##g' docs/index.html.in >
/<<PKGBUILDDIR>>/debian/tmp/usr/share/libsbml/docs/index.html
set -x ; \
for pyv in python3.13 ; do \
if [ -d /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/${pyv}/site-packages/ ] ; then
\
mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/lib/${pyv}/dist-packages ; \
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/${pyv}/site-packages/*
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/${pyv}/dist-packages ; \
fi ; \
done
+ [ -d /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/python3.13/site-packages/ ]
find /<<PKGBUILDDIR>>/debian/tmp/usr -type f -name "*.js" -delete
find /<<PKGBUILDDIR>>/debian/tmp/usr -type f -name "*.md5" -delete
find /<<PKGBUILDDIR>>/debian/tmp/usr -type f -exec chmod 644 {} +
find /<<PKGBUILDDIR>>/debian/tmp/usr/lib -name "*.mex*" -exec strip
--strip-unneeded {} + || true
find /<<PKGBUILDDIR>>/debian/tmp/usr/lib -name "*.mex*" -exec strip
--remove-section=.comment {} + || true
dpkg-shlibdeps /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex
-Tdebian/libsbml5-octave.substvars -l/usr/lib/x86_64-linux-gnu/octave/10.3.0
dpkg-shlibdeps: error: cannot read
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/octave/site/oct/*/*.mex: No such file or
directory
make[1]: *** [debian/rules:91: execute_after_dh_auto_install] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:53: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit
status 2
--------------------------------------------------------------------------------
From: Debian FTP Masters <[email protected]>
Subject: Bug#1125648: fixed in libsbml 5.20.5+dfsg-2
Date: Sun, 08 Feb 2026 20:54:25 +0000
To: [email protected]
Reply-To: Rafael Laboissière <[email protected]>
Message-Id: <[email protected]>
Source: libsbml
Source-Version: 5.20.5+dfsg-2
Done: Rafael Laboissière <[email protected]>
We believe that the bug you reported is fixed in the latest version of
libsbml, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Rafael Laboissière <[email protected]> (supplier of updated libsbml package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 08 Feb 2026 10:31:51 +0000
Source: libsbml
Architecture: source
Version: 5.20.5+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Rafael Laboissière <[email protected]>
Closes: 1125648
Changes:
libsbml (5.20.5+dfsg-2) unstable; urgency=medium
.
* Team upload.
* d/rules: Fix the value of CMAKE_INSTALL_LIBDIR in the CMake cache
(Closes: #1125648)
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