Package: src:libpwizlite
Version: 3.0.8-1
Severity: important
Tags: sid forky
User: [email protected]
Usertags: boost1.88
libpwizlite ftbfs with boost 1.88:
[...]
[ 30%] Building CXX object
src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK
-DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK
-DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK
-DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB
-DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK
-DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB
-DWITHOUT_MZ5 -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src
-I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/src/boost -isystem
/usr/include/hdf5/serial -g -O2 -fno-omit-frame-pointer
-mno-omit-leaf-frame-pointer -ffile-prefix-map=/<<PKGBUILDDIR>>=.
-flto=auto -ffat-lto-objects -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security
-fcf-protection
-fdebug-prefix-map=/<<PKGBUILDDIR>>=/usr/src/libpwizlite-3.0.8-1build3
-Wdate-time -D_FORTIFY_SOURCE=3 -O3 -DNDEBUG -std=gnu++17
-Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT
src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o
-MF
CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d
-o
CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o
-c /<<PKGBUILDDIR>>/src/pwiz/data/msdata/DefaultReaderList.cpp
/<<PKGBUILDDIR>>/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member
function ‘virtual pwiz::minimxml::SAXParser::Handler::Status
pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const
std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&,
pwiz::minimxml::SAXParser::Handler::stream_offset)’:
/<<PKGBUILDDIR>>/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47:
warning: unused parameter ‘position’ [-Wunused-parameter]
121 | stream_offset position)
| ~~~~~~~~~~~~~~^~~~~~~~
/<<PKGBUILDDIR>>/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member
function ‘virtual pwiz::minimxml::SAXParser::Handler::Status
pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&,
pwiz::minimxml::SAXParser::Handler::stream_offset)’:
/<<PKGBUILDDIR>>/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45:
warning: unused parameter ‘position’ [-Wunused-parameter]
162 | stream_offset position)
| ~~~~~~~~~~~~~~^~~~~~~~
/<<PKGBUILDDIR>>/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member
function ‘virtual pwiz::minimxml::SAXParser::Handler::Status
pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const
std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)’:
/<<PKGBUILDDIR>>/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45:
warning: unused parameter ‘position’ [-Wunused-parameter]
356 | stream_offset position)
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from
/<<PKGBUILDDIR>>/src/pwiz/data/msdata/DefaultReaderList.cpp:27:
/<<PKGBUILDDIR>>/src/pwiz/utility/misc/Filesystem.hpp:37:10: fatal
error: boost/filesystem/convenience.hpp: No such file or directory
37 | #include <boost/filesystem/convenience.hpp>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make[3]: *** [src/CMakeFiles/pwizlite-static.dir/build.make:278:
src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o]
Error 1
