Hi Chris, Hi Release Team, Chris, thanks for watching us! I happen to have had a look at an eventual portability of plink1.9 to arm64 yesterday evening and my assessment is that it could only be a matter of adjusting detection of sse2 support by adding the missing macro at a few tactical points. However, it is also likely that I will run into the following autopkgtest error on arm64 if I don't get my patch right:
PLINK v1.9.0-b.7.7 32-bit (22 Oct 2024)
cog-genomics.org/plink/1.9/
(C) 2005-2024 Shaun Purcell, Christopher Chang GNU General Public
License v3
Logging to plink.log.
Options in effect:
--file toy
--freq
128742 MB RAM detected; reserving 2047 MB for main workspace.
.ped scan complete (for binary autoconversion).
Performing single-pass .bed write (2 variants, 2 people).
94%malloc(): invalid size (unsorted)
qemu: uncaught target signal 6 (Aborted) - core dumped
Aborted
There are some comments in the code about misalignment issues
around a malloc invocation. I can check tonight if I actually
get somewhere with that strategy.
Alternatively, if inclusion of plink1.9 in arm64 is not an
option, then I suppose there is also the possibility to revert
to pique 1.0 and inline the missing dataset necessary to resolve
#1104275 into the debian/ directory instead of the upstream data
introduced in 1.1; I think the dependency of plink1.9 came along
with v1.1 while v1.0 worked fine with the older plain plink
package.
Have a nice day, :)
--
.''`. Étienne Mollier <emoll...@debian.org>
: :' : pgp: 8f91 b227 c7d6 f2b1 948c 8236 793c f67e 8f0d 11da
`. `' sent from /dev/pts/3, please excuse my verbosity
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