Package: ftp.debian.org Priority: normal Dear FTP team,
r-cran-genabel has a RC bug, which we would like to solve by removal from Debian. The upstream GenABEL R package was archived in 2018 and there is no support for it. Its companion data package was archived as well, therefore please also remove r-cran-genabel.data. Thanks! Charles Le Wed, Apr 16, 2025 at 04:29:17PM +0900, Charles Plessy a écrit : > Thanks a lot but maybe we just should remove r-cran-genabel altogether? > > https://cran.r-project.org/web/packages/GenABEL/index.html > > Have a nice day, > > Charles > > Le Wed, Apr 16, 2025 at 03:12:45PM +0800, liwenjun a écrit : > > Package: src:r-cran-genabel > > Version: 1.8-0-7 > > Severity: serious > > Tags: ftbfs trixie sid > > > > Dear maintainer: > > > > Hi, I'm summitting a patch for fixing this FTBFS problem while building > > with R 4.5.0 on Debian sid,trixie. > > > > My patch Fix-FTBFS-error.patch replace Calloc() and Free() with R_Calloc() > > and R_Free(), accoding to the R-project's NEWS(R: R News > > <https://cran.r-project.org/doc/manuals/r-release/NEWS.html>) > > > > And by the way, Please help me for uploading this patch to upstream if you > > think it's necessary. > > > > Best regards, > > > > liwenjun > > > > > Description: Fix FTBFS error on R 4.5.0 > > This patch replace Calloc() and Free() to R_Calloc() R_Free() > > for fixing FTBFS errors on DEBIAN sid, trixy. > > Accoding to the R-project's > > NEWS.(https://cran.r-project.org/doc/manuals/r-release/NEWS.html). > > R 4.5.0 has been changed those funtions. > > Author: liwenjun <liwen...@kylinos.cn> > > Origin: other, None > > Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1103201 > > Last-Update: 2025-04-16 > > > > --- r-cran-genabel-1.8-0.orig/src/fexact.c > > +++ r-cran-genabel-1.8-0/src/fexact.c > > @@ -178,7 +178,7 @@ fexact(int *nrow, int *ncol, int *table, > > //Maksim Struchalin, 14-June-2010: > > // In case of use R_alloc memory is freed only when routine .C finishes. > > We have got memorry leak in case when we call fexat in a loop "inside" ".C" > > . > > // equiv = (double *) R_alloc(iwkmax / 2, sizeof(double)); > > - equiv = (double *) Calloc(iwkmax / 2, double); // call > > Free(equiv) at the end. > > + equiv = (double *) R_Calloc(iwkmax / 2, double); // call > > R_Free(equiv) at the end. > > //_________________________________ > > > > > > @@ -302,7 +302,7 @@ fexact(int *nrow, int *ncol, int *table, > > dwrk + irwk); > > > > > > - Free(equiv); > > + R_Free(equiv); > > > > return; > > } > > > _______________________________________________ > > R-pkg-team mailing list > > r-pkg-t...@alioth-lists.debian.net > > https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/r-pkg-team > > > -- > Charles Plessy Nagahama, Yomitan, Okinawa, Japan > Debian Med packaging team http://www.debian.org/devel/debian-med > Tooting from home https://framapiaf.org/@charles_plessy > - You do not have my permission to use this email to train an AI - > > _______________________________________________ > R-pkg-team mailing list > r-pkg-t...@alioth-lists.debian.net > https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/r-pkg-team -- Charles Plessy Nagahama, Yomitan, Okinawa, Japan Debian Med packaging team http://www.debian.org/devel/debian-med Tooting from home https://framapiaf.org/@charles_plessy - You do not have my permission to use this email to train an AI -
