Package: src:smiles-scripts Version: 0.2.0+svn754+branch+system+deps-1 Severity: serious Tags: ftbfs trixie sid
Dear maintainer: During a rebuild of all packages in unstable, your package failed to build: -------------------------------------------------------------------------------- [...] debian/rules clean dh clean dh_auto_clean make -j2 distclean make[1]: Entering directory '/<<PKGBUILDDIR>>' rm -f tests/outputs/cdkcif2smiles_001.diff tests/outputs/cdkcif2smiles_002.diff tests/outputs/cdkcif2smiles_003.diff tests/outputs/cdkcif2xyz_001.diff tests/outputs/cdkcif2xyz_002.diff tests/outputs/cdkcif2xyz_003.diff tests/outputs/cdkdepict-cgi_001.diff tests/outputs/cdkdepict-cgi_002.diff tests/outputs/cdkdepict_001.diff tests/outputs/cdkdepict_002.diff tests/outputs/cdkdepict_003.diff tests/outputs/cdkdepict_004.diff tests/outputs/cdkdepict_005.diff tests/outputs/cdkdepict_006.diff tests/outputs/cdkdepict_007.diff tests/outputs/cdkdepict_008.diff tests/outputs/cdkdepict_009.diff tests/outputs/cdkdepict_010.diff tests/outputs/cdkdepict_021.diff tests/outputs/cdkdepict_022.diff tests/outputs/cdkdepict_023.diff tests/outputs/cdkrecharge_001.diff tests/outputs/cdkrecharge_002.diff tests/outputs/cdkrecharge_003.diff tests/outputs/cdkrecharge_004.diff tests/outputs/cdkrecharge_005.diff tests/outputs/cdkrecharge_006.diff tests/outputs/cdkrecharge_007.diff tests/outputs/cdkrecharge_008.d iff tests/outputs/cdkrecharge_009.diff tests/outputs/cdkrecharge_010.diff tests/outputs/cdkrecharge_011.diff tests/outputs/cdkrecharge_012.diff tests/outputs/cdkrecharge_013.diff tests/outputs/cdkrecharge_014.diff tests/outputs/cdkrecharge_015.diff tests/outputs/cdkrecharge_016.diff tests/outputs/cdkrecharge_017.diff tests/outputs/cdkrecharge_018.diff tests/outputs/cdkrecharge_019.diff tests/outputs/cdkrecharge_020.diff tests/outputs/cdksdf2inchi_001.diff tests/outputs/cdksdf2inchi_002.diff tests/outputs/cdksdf2inchi_003.diff tests/outputs/cdksdf2inchi_004.diff tests/outputs/cdksdf2inchi_005.diff tests/outputs/cdksdf2inchi_006.diff tests/outputs/cdksdf2smiles_001.diff tests/outputs/cdksdf2smiles_002.diff tests/outputs/cdksdf2smiles_003.diff tests/outputs/cdksdf2smiles_004.diff tests/outputs/cdksdf2smiles_005.diff tests/outputs/cdksdf2smiles_006.diff tests/outputs/cdksdf2smiles_007.diff tests/outputs/cdksdf2smiles_008.diff tests/outputs/cdksdf2smiles_009.diff tests/outputs/cdksdf2smi les_010.diff tests/outputs/cml-to-smi_001.diff tests/outputs/cml-to-smi_002.diff tests/outputs/cml-to-smi_003.diff tests/outputs/cml-to-smi_004.diff tests/outputs/cml-to-smi_005.diff tests/outputs/cml-to-smi_006.diff tests/outputs/cml-to-smi_007.diff tests/outputs/cml-to-smi_008.diff tests/outputs/cml-to-smi_009.diff tests/outputs/opsin_001.diff tests/outputs/sdf-to-smi_001.diff tests/outputs/sdf-to-smi_002.diff tests/outputs/sdf-to-smi_003.diff tests/outputs/sdf-to-smi_004.diff tests/outputs/sdf-to-smi_005.diff tests/outputs/sdf-to-smi_006.diff tests/outputs/sdf-to-smi_007.diff tests/outputs/sdf-to-smi_008.diff tests/outputs/sdf-to-smi_009.diff tests/outputs/sdf-to-smi_010.diff tests/outputs/sdf-to-smi_011.diff tests/outputs/sdf-to-smi_012.diff tests/outputs/sdf-to-smi_013.diff tests/outputs/sdf-to-smi_014.diff tests/outputs/sdf-to-smi_015.diff tests/outputs/sdf-to-smi_016.diff tests/outputs/sdf-to-smi_017.diff tests/outputs/sdf-to-smi_018.diff tests/outputs/sdf-to-smi_019.diff tes ts/outputs/sdf-to-smi_020.diff tests/outputs/sdf-to-smi_021.diff tests/outputs/sdf-to-smi_022.diff tests/outputs/sdf-to-smi_023.diff tests/outputs/sdf-to-smi_024.diff tests/outputs/sdf-to-smi_025.diff tests/outputs/sdf-to-smi_026.diff tests/outputs/sdf-to-smi_027.diff tests/outputs/sdf-to-smi_028.diff tests/outputs/smi_canonicalise_001.diff tests/outputs/smi_canonicalise_002.diff tests/outputs/smi_canonicalise_003.diff tests/outputs/smi_canonicalise_004.diff tests/outputs/smi_canonicalise_005.diff tests/outputs/smi_canonicalise_006.diff tests/outputs/smi_canonicalise_007.diff tests/outputs/smi_canonicalise_008.diff tests/outputs/smi_canonicalise_009.diff tests/outputs/smi_canonicalise_010.diff tests/outputs/smi_canonicalise_011.diff tests/outputs/smi_canonicalise_012.diff tests/outputs/smi_canonicalise_013.diff tests/outputs/smi_canonicalise_014.diff tests/outputs/smi_canonicalise_015.diff tests/outputs/smi_canonicalise_016.diff tests/outputs/smi_canonicalise_017.diff tests/outputs/ smi_canonicalise_018.diff tests/outputs/smi_canonicalise_019.diff tests/outputs/smi_canonicalise_020.diff tests/outputs/smi_canonicalise_021.diff tests/outputs/smi_canonicalise_022.diff tests/outputs/smi_canonicalise_023.diff tests/outputs/smi_canonicalise_024.diff tests/outputs/smi_canonicalise_025.diff tests/outputs/smi_canonicalise_026.diff tests/outputs/smi_canonicalise_027.diff tests/outputs/smi_canonicalise_028.diff tests/outputs/smi_canonicalise_029.diff tests/outputs/smi_canonicalise_030.diff tests/outputs/smi_canonicalise_031.diff tests/outputs/smi_canonicalise_032.diff tests/outputs/smi_canonicalise_033.diff tests/outputs/smi_chemical_formula_001.diff tests/outputs/smi_chemical_formula_002.diff tests/outputs/smi_isomorphism_001.diff tests/outputs/smi_isomorphism_002.diff tests/outputs/smi_isomorphism_003.diff tests/outputs/smi_isomorphism_004.diff tests/outputs/smi_isomorphism_005.diff tests/outputs/smi_isomorphism_006.diff tests/outputs/smi_isomorphism_007.diff tests/outp uts/smi_isomorphism_008.diff tests/outputs/smi_isomorphism_009.diff tests/outputs/smi_isomorphism_010.diff tests/outputs/smi_isomorphism_011.diff tests/outputs/smi_isomorphism_012.diff tests/outputs/smi_isomorphism_013.diff tests/outputs/smi_isomorphism_014.diff tests/outputs/smi_isomorphism_015.diff tests/outputs/smi_isomorphism_016.diff tests/outputs/smi_isomorphism_017.diff tests/outputs/smi_isomorphism_018.diff tests/outputs/smi_isomorphism_019.diff tests/outputs/smi_isomorphism_020.diff tests/outputs/smi_isomorphism_021.diff tests/outputs/smi_isomorphism_022.diff tests/outputs/smi_isomorphism_023.diff tests/outputs/smi_isomorphism_024.diff tests/outputs/smi_isomorphism_025.diff tests/outputs/smi_isomorphism_026.diff tests/outputs/smi_isomorphism_027.diff tests/outputs/smi_isomorphism_028.diff tests/outputs/smi_isomorphism_029.diff tests/outputs/smi_isomorphism_030.diff tests/outputs/smi_isomorphism_031.diff tests/outputs/smi_isomorphism_032.diff tests/outputs/smi_isomorphism_03 3.diff tests/outputs/smi_isomorphism_034.diff tests/outputs/smi_isomorphism_035.diff tests/outputs/smi_isomorphism_036.diff tests/outputs/smi_parse_001.diff tests/outputs/smi_parse_002.diff tests/outputs/smi_parse_003.diff rm -f version.h rm -f src/lib/perl5/COD/ToolsVersion.pm scripts/cod-tools-version rm -f scripts/.cod-tools-version.d rm -f tests/outputs/junit/net/crystallography/vector/space/ChangeOfBasisTest.log tests/outputs/junit/net/crystallography/helpers/cdk/OrthogonaliseAtomCoordinatesTest.log rm -f src/Version.java rm -f classes/Version.class rm -f classes/net/crystallography/vector/space/ChangeOfBasis.class classes/net/crystallography/helpers/cdk/OrthogonaliseAtomCoordinates.class classes/CDKCif2SdfHelp.class classes/CDKCif2SmilesHelp.class classes/CDKCif2XyzHelp.class classes/CDKDepictHelp.class classes/CDKRechargeHelp.class classes/CDKSdf2InChIHelp.class classes/CDKSdf2SmilesHelp.class classes/EPSOutputOption.class classes/OutputOption.class classes/PDFOutputOption.class classes/SVGOutputOption.class classes/VersionOption.class classes/cdkcif2sdf.class classes/cdkcif2smiles.class classes/cdkcif2xyz.class classes/cdkdepict.class classes/cdkrecharge.class classes/cdksdf2inchi.class classes/cdksdf2smiles.class rm -f MANIFEST.txt [... snipped ...] < 6.87778 8.95715 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 6.47633 10.1964 m < 6.27560 10.8161 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 5.87414 12.0553 m < 5.67342 12.6750 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 5.27196 13.9142 m < 5.07124 14.5339 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 20.8192 1.96200 m --- > 2.00321 15.5940 m 1135,1207c979 < 18.8556 4.55400 m < 18.2010 4.55400 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 16.8919 4.55400 m < 16.2374 4.55400 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 14.9283 4.55400 m < 14.2738 4.55400 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 12.9647 4.55400 m < 12.3101 4.55400 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 11.0010 4.55400 m < 10.3465 4.55400 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 9.03739 4.55400 m < 8.38284 4.55400 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 25.2352 15.5940 m --- > 6.41921 1.96200 m 1219,1280c991,992 < 22.1672 14.5339 m < 21.9665 13.9142 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 21.5650 12.6750 m < 21.3643 12.0553 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 20.9628 10.8161 m < 20.7621 10.1964 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 20.3606 8.95715 m < 20.1599 8.33752 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 19.7585 7.09825 m < 19.5577 6.47861 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 19.1563 5.23934 m < 18.9555 4.61970 l --- > 20.8192 1.96200 m > 25.2352 15.5940 l 1298,1369d1009 < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 13.6674 20.8849 m < 14.1954 20.4965 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 15.2514 19.7198 m < 15.7794 19.3314 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 16.8354 18.5547 m < 17.3634 18.1664 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 18.4194 17.3896 m < 18.9474 17.0013 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 20.0034 16.2245 m < 20.5314 15.8362 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG < .594828 w < 1 J < 1 j < .266667 .266667 .266667 RG < newpath < 21.5874 15.0594 m < 22.1154 14.6711 l < S < 1.00000 w < 2 J < 0 j < 0.00000 0.00000 0.00000 RG 1384a1025,1037 > 0.00000 0.00000 0.00000 RG > .266667 .266667 .266667 RG > .594828 w > 1 J > 1 j > newpath > 21.5000 12.0000 m > 21.5000 16.1421 18.1421 19.5000 14.0000 19.5000 c > 9.85786 19.5000 6.50000 16.1421 6.50000 12.0000 c > 6.50000 7.85786 9.85786 4.50000 14.0000 4.50000 c > 18.1421 4.50000 21.5000 7.85786 21.5000 12.0000 c > h > S tests/cases/cdkrecharge_001.opt: OK tests/cases/cdkrecharge_002.sh: FAILED: 967,968c967,968 < 99.1719 10.6899 m < 89.2941 4.98697 l --- > 99.4600 10.5237 m > 89.2941 4.65439 l 1003,1004c1003,1004 < 89.2839 27.8164 m < 99.1683 22.1055 l --- > 89.2840 28.1490 m > 99.4562 22.2717 l 1039,1040c1039,1040 < 79.4098 10.6979 m < 79.4061 22.1135 l --- > 79.1218 10.5317 m > 79.1181 22.2797 l tests/cases/cdkrecharge_003.opt: OK tests/cases/cdkrecharge_004.opt: OK tests/cases/cdkrecharge_005.opt: OK tests/cases/cdkrecharge_006.inp: OK tests/cases/cdkrecharge_007.opt: OK tests/cases/cdkrecharge_008.inp: OK tests/cases/cdkrecharge_009.opt: OK tests/cases/cdkrecharge_010.opt: OK tests/cases/cdkrecharge_011.opt: OK tests/cases/cdkrecharge_012.inp: OK tests/cases/cdkrecharge_013.inp: OK tests/cases/cdkrecharge_014.inp: OK tests/cases/cdkrecharge_015.inp: OK tests/cases/cdkrecharge_016.sh: OK tests/cases/cdkrecharge_017.sh: OK tests/cases/cdkrecharge_018.inp: OK tests/cases/cdkrecharge_019.inp: OK tests/cases/cdkrecharge_020.inp: OK tests/cases/cdksdf2inchi_001.opt: OK tests/cases/cdksdf2inchi_002.inp: OK tests/cases/cdksdf2inchi_003.inp: OK tests/cases/cdksdf2inchi_004.sh: OK tests/cases/cdksdf2inchi_005.sh: OK tests/cases/cdksdf2inchi_006.inp: OK tests/cases/cdksdf2smiles_001.opt: OK tests/cases/cdksdf2smiles_002.inp: OK tests/cases/cdksdf2smiles_003.inp: OK tests/cases/cdksdf2smiles_004.inp: OK tests/cases/cdksdf2smiles_005.inp: OK tests/cases/cdksdf2smiles_006.inp: FAILED: 1c1 < C1=CC=C(C(C(=C(C(=C(C(C2=CC=CC=C2)=CC)C)C=3C=CC=CC3)C=4C=CC=CC4)C)=CC)C=C1 1502405 --- > C1=CC=C(/C(/C(=C(/C(=C(/C(/C2=CC=CC=C2)=C/C)\C)/C=3C=CC=CC3)\C=4C=CC=CC4)/C)=C\C)C=C1 > 1502405 tests/cases/cdksdf2smiles_007.inp: OK tests/cases/cdksdf2smiles_008.inp: OK tests/cases/cdksdf2smiles_009.inp: OK tests/cases/cdksdf2smiles_010.inp: FAILED: 1c1 < C1=CC=C(C(C(=C(C(=C(C(C2=CC=CC=C2)=CC)C)C=3C=CC=CC3)C=4C=CC=CC4)C)=CC)C=C1 1502405 --- > c1ccc(/C(/C(=C(/C(=C(/C(/c2ccccc2)=C/C)\C)/c3ccccc3)\c4ccccc4)/C)=C\C)cc1 > 1502405 tests/cases/cml-to-smi_001.inp: OK tests/cases/cml-to-smi_002.inp: FAILED: 1c1 < c1ccc(C(C(=C(C(=C(C(c2ccccc2)=CC)C)c3ccccc3)c4ccccc4)C)=CC)cc1 1502405 --- > c1ccc(/C(/C(=C(/C(=C(/C(/c2ccccc2)=C/C)\C)/c3ccccc3)\c4ccccc4)/C)=C\C)cc1 > 1502405 tests/cases/cml-to-smi_003.inp: OK tests/cases/cml-to-smi_004.inp: OK tests/cases/cml-to-smi_005.inp: OK tests/cases/cml-to-smi_006.inp: OK tests/cases/cml-to-smi_007.inp: OK tests/cases/cml-to-smi_008.inp: OK tests/cases/cml-to-smi_009.inp: OK tests/cases/opsin_001.sh: OK tests/cases/sdf-to-smi_001.inp: OK tests/cases/sdf-to-smi_002.inp: OK tests/cases/sdf-to-smi_003.inp: OK tests/cases/sdf-to-smi_004.inp: FAILED: 1c1,5 < C1=CC=CC=C1 --- > Use of uninitialized value $SMILES in substitution (s///) at <script_name> > line <line_no>. > Use of uninitialized value $SMILES in substitution (s///) at <script_name> > line <line_no>. > Use of uninitialized value $SMILES in substitution (s///) at <script_name> > line <line_no>. > undef > undef 3d6 < C1=CC=CC2=CC=C3C4=CC=C5C=CC=CC5=C4C=CC3=C21 tests/cases/sdf-to-smi_005.inp: OK tests/cases/sdf-to-smi_006.inp: OK tests/cases/sdf-to-smi_007.inp: OK tests/cases/sdf-to-smi_008.inp: OK tests/cases/sdf-to-smi_009.inp: OK tests/cases/sdf-to-smi_010.inp: OK tests/cases/sdf-to-smi_011.inp: OK tests/cases/sdf-to-smi_012.inp: OK tests/cases/sdf-to-smi_013.inp: OK tests/cases/sdf-to-smi_014.inp: OK tests/cases/sdf-to-smi_015.inp: OK tests/cases/sdf-to-smi_016.inp: OK tests/cases/sdf-to-smi_017.inp: OK tests/cases/sdf-to-smi_018.inp: OK tests/cases/sdf-to-smi_019.inp: OK tests/cases/sdf-to-smi_020.inp: OK tests/cases/sdf-to-smi_021.inp: OK tests/cases/sdf-to-smi_022.inp: OK tests/cases/sdf-to-smi_023.inp: OK tests/cases/sdf-to-smi_024.inp: OK tests/cases/sdf-to-smi_025.inp: OK tests/cases/sdf-to-smi_026.inp: OK tests/cases/sdf-to-smi_027.inp: OK tests/cases/sdf-to-smi_028.inp: OK tests/cases/smi_canonicalise_001.inp: OK tests/cases/smi_canonicalise_002.inp: OK tests/cases/smi_canonicalise_003.inp: OK tests/cases/smi_canonicalise_004.inp: OK tests/cases/smi_canonicalise_005.inp: OK tests/cases/smi_canonicalise_006.inp: OK tests/cases/smi_canonicalise_007.inp: OK tests/cases/smi_canonicalise_008.inp: OK OK tests/cases/smi_canonicalise_009.inp: tests/cases/smi_canonicalise_010.inp: OK tests/cases/smi_canonicalise_011.inp: OK tests/cases/smi_canonicalise_012.inp: OK tests/cases/smi_canonicalise_013.inp: OK tests/cases/smi_canonicalise_014.inp: OK tests/cases/smi_canonicalise_015.inp: OK OK tests/cases/smi_canonicalise_016.inp: tests/cases/smi_canonicalise_017.inp: OK tests/cases/smi_canonicalise_018.inp: OK tests/cases/smi_canonicalise_019.inp: OK tests/cases/smi_canonicalise_020.inp: OK tests/cases/smi_canonicalise_021.inp: OK tests/cases/smi_canonicalise_022.inp: OK tests/cases/smi_canonicalise_023.inp: OK tests/cases/smi_canonicalise_024.inp: OK tests/cases/smi_canonicalise_025.inp: OK tests/cases/smi_canonicalise_026.inp: OK tests/cases/smi_canonicalise_027.inp: OK tests/cases/smi_canonicalise_028.inp: OK tests/cases/smi_canonicalise_029.inp: OK tests/cases/smi_canonicalise_030.inp: OK tests/cases/smi_canonicalise_031.inp: OK tests/cases/smi_canonicalise_032.inp: OK tests/cases/smi_canonicalise_033.inp: OK tests/cases/smi_chemical_formula_001.inp: OK tests/cases/smi_chemical_formula_002.inp: OK tests/cases/smi_isomorphism_001.sh: OK tests/cases/smi_isomorphism_002.sh: OK tests/cases/smi_isomorphism_003.sh: OK tests/cases/smi_isomorphism_004.sh: OK tests/cases/smi_isomorphism_005.sh: OK tests/cases/smi_isomorphism_006.sh: OK tests/cases/smi_isomorphism_007.sh: OK tests/cases/smi_isomorphism_008.sh: OK tests/cases/smi_isomorphism_009.sh: OK tests/cases/smi_isomorphism_010.sh: OK tests/cases/smi_isomorphism_011.sh: OK tests/cases/smi_isomorphism_012.sh: OK tests/cases/smi_isomorphism_013.sh: OK tests/cases/smi_isomorphism_014.sh: OK tests/cases/smi_isomorphism_015.sh: OK tests/cases/smi_isomorphism_016.sh: OK tests/cases/smi_isomorphism_017.sh: OK tests/cases/smi_isomorphism_018.sh: OK tests/cases/smi_isomorphism_019.sh: OK tests/cases/smi_isomorphism_020.sh: OK tests/cases/smi_isomorphism_021.sh: OK tests/cases/smi_isomorphism_022.sh: OK tests/cases/smi_isomorphism_023.sh: OK tests/cases/smi_isomorphism_024.sh: OK tests/cases/smi_isomorphism_025.sh: OK tests/cases/smi_isomorphism_026.sh: OK tests/cases/smi_isomorphism_027.sh: OK tests/cases/smi_isomorphism_028.sh: OK tests/cases/smi_isomorphism_029.sh: OK tests/cases/smi_isomorphism_030.sh: OK tests/cases/smi_isomorphism_031.sh: OK tests/cases/smi_isomorphism_032.sh: OK tests/cases/smi_isomorphism_033.sh: OK tests/cases/smi_isomorphism_034.sh: OK tests/cases/smi_isomorphism_035.sh: OK tests/cases/smi_isomorphism_036.sh: OK tests/cases/smi_parse_001.inp: OK tests/cases/smi_parse_002.inp: OK tests/cases/smi_parse_003.sh: OK net.crystallography.vector.space.ChangeOfBasisTest: OK net.crystallography.helpers.cdk.OrthogonaliseAtomCoordinatesTest: OK OK make[2]: Leaving directory '/<<PKGBUILDDIR>>' cat debian/failing-tests | xargs rm find tests/outputs -name '*.diff' -a -size +0 | xargs --no-run-if-empty -i echo FAILED: {} FAILED: tests/outputs/opsin_001.diff FAILED: tests/outputs/cdkdepict_003.diff FAILED: tests/outputs/cdkdepict_002.diff find tests/outputs -name '*.diff' -a -size +0 | xargs --no-run-if-empty false # Detect test failures make[1]: *** [debian/rules:16: override_dh_auto_test] Error 123 make[1]: Leaving directory '/<<PKGBUILDDIR>>' make: *** [debian/rules:6: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 -------------------------------------------------------------------------------- The above is just how the build ends and not necessarily the most relevant part. If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202501/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you could not reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:smiles-scripts, so that this is still visible in the BTS web page for this package. Thanks.