Source: rdkit
Version: 202409.2-3
Severity: serious
Tags: ftbfs
Hello,
rdkit FTBFS in sid on s390x and ppc64. This manifests in the failure of
many tests:
The following tests FAILED:
8 - testDataStructs (Subprocess aborted)
9 - testFPB (Subprocess aborted)
10 - testMultiFPB (Subprocess aborted)
13 - pyDiscreteValueVect (Failed)
14 - pySparseIntVect (Failed)
15 - pyFPB (Failed)
17 - testGrid (Subprocess aborted)
36 - graphmoltestPickler (Subprocess aborted)
54 - pickleTestsCatch (Failed)
79 - fileParsersCatchTest (Failed)
89 - substructTestCatch (Failed)
91 - testReaction (Subprocess aborted)
94 - rxnTestCatch (Failed)
95 - pyChemReactions (Failed)
96 - pyChemReactionEnumerations (Failed)
124 - pyMolDescriptors (Failed)
157 - moldraw2DTest1 (Subprocess aborted)
158 - moldraw2DTestCatch (Failed)
159 - moldraw2DRxnTest1 (Subprocess aborted)
160 - pyMolDraw2D (Failed)
179 - substructLibraryTest (Subprocess aborted)
191 - pyGraphMolWrap (Failed)
223 - pyRanker (Failed)
225 - pyFeatures (Failed)
From a quick glance it seems that a lot of problems are related to
Python pickle reading. Upstream has made some fixes related to
endianness in version 202409.4 [1], thus packaging the newer upstream
version might mitigate the problem.
[1] https://github.com/rdkit/rdkit/pull/8105
Andrius
