Source: srst2 Version: 0.2.0-12 User: debian-pyt...@lists.debian.org Usertags: syntaxwarning
Hi Maintainer The SyntaxWarning below were emitted when this package was tested with pipuarts[1]. Regards Graham [1] https://piuparts.debian.org/sid/source/s/srst2.html Setting up python3 (3.12.6-1) ... /usr/share/srst2/database_clustering/VFDB_cdhit_to_csv.py:53: SyntaxWarning: invalid escape sequence '\(' in_brackets = re.findall('\((.*?)\)', full_name) /usr/share/srst2/database_clustering/align_plot_tree_min3.py:28: SyntaxWarning: invalid escape sequence '\.' r(''' /usr/share/srst2/getmlst.py:181: SyntaxWarning: invalid escape sequence '\d' m = re.match('>(.*)([_-])(\d*)',head).groups() /usr/share/srst2/srst2.py:90: SyntaxWarning: invalid escape sequence '\-' parser.add_argument('--other', type=str, help='Other arguments to pass to bowtie2 (must be escaped, e.g. "\--no-mixed".', required=False) /usr/share/srst2/srst2.py:99: SyntaxWarning: invalid escape sequence '\-' parser.add_argument('--samtools_args', type=str, help='Other arguments to pass to samtools mpileup (must be escaped, e.g. "\-A").', required=False) /usr/share/srst2/srst2.py:241: SyntaxWarning: invalid escape sequence '\d' m = re.search("NM:i:(\d+)\s",line)
