Source: prody Version: 2.4.1+dfsg-2 User: debian-pyt...@lists.debian.org Usertags: syntaxwarning
Hi Maintainer The SyntaxWarning below were emitted when this package was tested with pipuarts[1]. Regards Graham [1] https://piuparts.debian.org/sid/source/p/prody.html Setting up python3-prody (2.4.1+dfsg-2) ... /usr/lib/python3/dist-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' __doc__ += """ /usr/lib/python3/dist-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' """This module defines a class for selecting subsets of atoms. You can read /usr/lib/python3/dist-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' RE_SCHARS = re_compile('`[\w\W]*?`') /usr/lib/python3/dist-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' RE_REGEXP = re_compile('"[\w\W]*"') /usr/lib/python3/dist-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' _ = '[-+]?\d+(\.\d*)?([eE]\d+)?' /usr/lib/python3/dist-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' RE_NRANGE = re_compile(_ + '\ *(to|:)\ *' + _) /usr/lib/python3/dist-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' pp.Optional(pp.Regex('(\ *:\ *' + _ + ')'))) /usr/lib/python3/dist-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' """Build a covariance matrix for *coordsets* using mean coordinates /usr/lib/python3/dist-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' """Parse DSSP data from file *dssp* into :class:`.AtomGroup` instance /usr/lib/python3/dist-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' pdbext = compile('\.(pdb|ent)(\.gz)?$', IGNORECASE) /usr/lib/python3/dist-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' pdbext = compile('\.(pdb|ent)\.gz$', IGNORECASE) /usr/lib/python3/dist-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' pdbext = compile('\.(pdb|ent)$', IGNORECASE) /usr/lib/python3/dist-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' """Apply one of the normalizations discussed in [MLC05]_ to *mutinfo* /usr/lib/python3/dist-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' """Returns wrapped lines from :func:`textwrap.wrap` after *join*\ing them.
