Package: src:sklearn-pandas
Version: 2.2.0-3
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
pybuild --configure -i python{version} -p 3.12
I: pybuild base:311: python3.12 setup.py config
/<<PKGBUILDDIR>>/setup.py:5: SetuptoolsDeprecationWarning: The test command is
disabled and references to it are deprecated.
!!
********************************************************************************
Please remove any references to `setuptools.command.test` in all
supported versions of the affected package.
By 2024-Nov-15, you need to update your project and remove deprecated
calls
[... snipped ...]
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[41]>", line 1, in <module>
mapper3 = DataFrameMapper([
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
np.round(mapper3.fit_transform(data.copy()))
Expecting:
array([[1., 0., 0., 4.],
[0., 1., 0., 6.],
[0., 1., 0., 3.],
[0., 0., 1., 3.],
[1., 0., 0., 2.],
[0., 1., 0., 3.],
[1., 0., 0., 5.],
[0., 0., 1., 4.]])
**********************************************************************
File "README.rst", line 344, in README.rst
Failed example:
np.round(mapper3.fit_transform(data.copy()))
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[42]>", line 1, in <module>
np.round(mapper3.fit_transform(data.copy()))
^^^^^^^
NameError: name 'mapper3' is not defined
Trying:
mapper4 = DataFrameMapper([
('pet', sklearn.preprocessing.LabelBinarizer()),
('children', None)
], default=sklearn.preprocessing.StandardScaler())
Expecting nothing
**********************************************************************
File "README.rst", line 360, in README.rst
Failed example:
mapper4 = DataFrameMapper([
('pet', sklearn.preprocessing.LabelBinarizer()),
('children', None)
], default=sklearn.preprocessing.StandardScaler())
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[43]>", line 1, in <module>
mapper4 = DataFrameMapper([
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
np.round(mapper4.fit_transform(data.copy()), 1)
Expecting:
array([[ 1. , 0. , 0. , 4. , 2.3],
[ 0. , 1. , 0. , 6. , -0.9],
[ 0. , 1. , 0. , 3. , 0.1],
[ 0. , 0. , 1. , 3. , -0.7],
[ 1. , 0. , 0. , 2. , -0.5],
[ 0. , 1. , 0. , 3. , 0.8],
[ 1. , 0. , 0. , 5. , -0.3],
[ 0. , 0. , 1. , 4. , -0.7]])
**********************************************************************
File "README.rst", line 364, in README.rst
Failed example:
np.round(mapper4.fit_transform(data.copy()), 1)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[44]>", line 1, in <module>
np.round(mapper4.fit_transform(data.copy()), 1)
^^^^^^^
NameError: name 'mapper4' is not defined
Trying:
from sklearn_pandas import gen_features
Expecting nothing
**********************************************************************
File "README.rst", line 390, in README.rst
Failed example:
from sklearn_pandas import gen_features
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[45]>", line 1, in <module>
from sklearn_pandas import gen_features
File "/<<PKGBUILDDIR>>/sklearn_pandas/__init__.py", line 6, in <module>
from .dataframe_mapper import DataFrameMapper # NOQA
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/<<PKGBUILDDIR>>/sklearn_pandas/dataframe_mapper.py", line 8, in
<module>
from .pipeline import make_transformer_pipeline, _call_fit,
TransformerPipeline
File "/<<PKGBUILDDIR>>/sklearn_pandas/pipeline.py", line 1, in <module>
import six
ModuleNotFoundError: No module named 'six'
Trying:
feature_def = gen_features(
columns=['col1', 'col2', 'col3'],
classes=[sklearn.preprocessing.LabelEncoder]
)
Expecting nothing
**********************************************************************
File "README.rst", line 391, in README.rst
Failed example:
feature_def = gen_features(
columns=['col1', 'col2', 'col3'],
classes=[sklearn.preprocessing.LabelEncoder]
)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[46]>", line 1, in <module>
feature_def = gen_features(
^^^^^^^^^^^^
NameError: name 'gen_features' is not defined
Trying:
feature_def
Expecting:
[('col1', [LabelEncoder()], {}), ('col2', [LabelEncoder()], {}), ('col3',
[LabelEncoder()], {})]
**********************************************************************
File "README.rst", line 395, in README.rst
Failed example:
feature_def
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[47]>", line 1, in <module>
feature_def
NameError: name 'feature_def' is not defined
Trying:
mapper5 = DataFrameMapper(feature_def)
Expecting nothing
**********************************************************************
File "README.rst", line 397, in README.rst
Failed example:
mapper5 = DataFrameMapper(feature_def)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[48]>", line 1, in <module>
mapper5 = DataFrameMapper(feature_def)
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
data5 = pd.DataFrame({
'col1': ['yes', 'no', 'yes'],
'col2': [True, False, False],
'col3': ['one', 'two', 'three']
})
Expecting nothing
ok
Trying:
mapper5.fit_transform(data5)
Expecting:
array([[1, 1, 0],
[0, 0, 2],
[1, 0, 1]])
**********************************************************************
File "README.rst", line 403, in README.rst
Failed example:
mapper5.fit_transform(data5)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[50]>", line 1, in <module>
mapper5.fit_transform(data5)
^^^^^^^
NameError: name 'mapper5' is not defined
Trying:
from sklearn.impute import SimpleImputer
Expecting nothing
ok
Trying:
import numpy as np
Expecting nothing
ok
Trying:
feature_def = gen_features(
columns=[['col1'], ['col2'], ['col3']],
classes=[{'class': SimpleImputer, 'strategy':'most_frequent'}]
)
Expecting nothing
**********************************************************************
File "README.rst", line 414, in README.rst
Failed example:
feature_def = gen_features(
columns=[['col1'], ['col2'], ['col3']],
classes=[{'class': SimpleImputer, 'strategy':'most_frequent'}]
)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[53]>", line 1, in <module>
feature_def = gen_features(
^^^^^^^^^^^^
NameError: name 'gen_features' is not defined
Trying:
mapper6 = DataFrameMapper(feature_def)
Expecting nothing
**********************************************************************
File "README.rst", line 418, in README.rst
Failed example:
mapper6 = DataFrameMapper(feature_def)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[54]>", line 1, in <module>
mapper6 = DataFrameMapper(feature_def)
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
data6 = pd.DataFrame({
'col1': [np.nan, 1, 1, 2, 3],
'col2': [True, False, np.nan, np.nan, True],
'col3': [0, 0, 0, np.nan, np.nan]
})
Expecting nothing
ok
Trying:
mapper6.fit_transform(data6)
Expecting:
array([[1.0, True, 0.0],
[1.0, False, 0.0],
[1.0, True, 0.0],
[2.0, True, 0.0],
[3.0, True, 0.0]], dtype=object)
**********************************************************************
File "README.rst", line 424, in README.rst
Failed example:
mapper6.fit_transform(data6)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[56]>", line 1, in <module>
mapper6.fit_transform(data6)
^^^^^^^
NameError: name 'mapper6' is not defined
Trying:
feature_def = gen_features(
columns=['col1', 'col2', 'col3'],
classes=[sklearn.preprocessing.LabelEncoder],
prefix="lblencoder_"
)
Expecting nothing
**********************************************************************
File "README.rst", line 434, in README.rst
Failed example:
feature_def = gen_features(
columns=['col1', 'col2', 'col3'],
classes=[sklearn.preprocessing.LabelEncoder],
prefix="lblencoder_"
)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[57]>", line 1, in <module>
feature_def = gen_features(
^^^^^^^^^^^^
NameError: name 'gen_features' is not defined
Trying:
mapper5 = DataFrameMapper(feature_def)
Expecting nothing
**********************************************************************
File "README.rst", line 439, in README.rst
Failed example:
mapper5 = DataFrameMapper(feature_def)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[58]>", line 1, in <module>
mapper5 = DataFrameMapper(feature_def)
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
data5 = pd.DataFrame({
'col1': ['yes', 'no', 'yes'],
'col2': [True, False, False],
'col3': ['one', 'two', 'three']
})
Expecting nothing
ok
Trying:
_ = mapper5.fit_transform(data5)
Expecting nothing
**********************************************************************
File "README.rst", line 445, in README.rst
Failed example:
_ = mapper5.fit_transform(data5)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[60]>", line 1, in <module>
_ = mapper5.fit_transform(data5)
^^^^^^^
NameError: name 'mapper5' is not defined
Trying:
mapper5.transformed_names_
Expecting:
['lblencoder_col1', 'lblencoder_col2', 'lblencoder_col3']
**********************************************************************
File "README.rst", line 446, in README.rst
Failed example:
mapper5.transformed_names_
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[61]>", line 1, in <module>
mapper5.transformed_names_
^^^^^^^
NameError: name 'mapper5' is not defined
Trying:
from sklearn.feature_selection import SelectKBest, chi2
Expecting nothing
ok
Trying:
mapper_fs = DataFrameMapper([(['children','salary'], SelectKBest(chi2,
k=1))])
Expecting nothing
**********************************************************************
File "README.rst", line 455, in README.rst
Failed example:
mapper_fs = DataFrameMapper([(['children','salary'], SelectKBest(chi2,
k=1))])
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[63]>", line 1, in <module>
mapper_fs = DataFrameMapper([(['children','salary'], SelectKBest(chi2,
k=1))])
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
mapper_fs.fit_transform(data[['children','salary']], data['pet'])
Expecting:
array([[90.],
[24.],
[44.],
[27.],
[32.],
[59.],
[36.],
[27.]])
**********************************************************************
File "README.rst", line 456, in README.rst
Failed example:
mapper_fs.fit_transform(data[['children','salary']], data['pet'])
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[64]>", line 1, in <module>
mapper_fs.fit_transform(data[['children','salary']], data['pet'])
^^^^^^^^^
NameError: name 'mapper_fs' is not defined
Trying:
mapper5 = DataFrameMapper([
('pet', CountVectorizer()),
], sparse=True)
Expecting nothing
**********************************************************************
File "README.rst", line 472, in README.rst
Failed example:
mapper5 = DataFrameMapper([
('pet', CountVectorizer()),
], sparse=True)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[65]>", line 1, in <module>
mapper5 = DataFrameMapper([
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
type(mapper5.fit_transform(data))
Expecting:
<class 'scipy.sparse._csr.csr_matrix'>
**********************************************************************
File "README.rst", line 475, in README.rst
Failed example:
type(mapper5.fit_transform(data))
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[66]>", line 1, in <module>
type(mapper5.fit_transform(data))
^^^^^^^
NameError: name 'mapper5' is not defined
Trying:
from sklearn_pandas import NumericalTransformer
Expecting nothing
**********************************************************************
File "README.rst", line 488, in README.rst
Failed example:
from sklearn_pandas import NumericalTransformer
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[67]>", line 1, in <module>
from sklearn_pandas import NumericalTransformer
File "/<<PKGBUILDDIR>>/sklearn_pandas/__init__.py", line 6, in <module>
from .dataframe_mapper import DataFrameMapper # NOQA
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/<<PKGBUILDDIR>>/sklearn_pandas/dataframe_mapper.py", line 8, in
<module>
from .pipeline import make_transformer_pipeline, _call_fit,
TransformerPipeline
File "/<<PKGBUILDDIR>>/sklearn_pandas/pipeline.py", line 1, in <module>
import six
ModuleNotFoundError: No module named 'six'
Trying:
mapper5 = DataFrameMapper([
('children', NumericalTransformer('log')),
])
Expecting nothing
**********************************************************************
File "README.rst", line 489, in README.rst
Failed example:
mapper5 = DataFrameMapper([
('children', NumericalTransformer('log')),
])
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[68]>", line 1, in <module>
mapper5 = DataFrameMapper([
^^^^^^^^^^^^^^^
NameError: name 'DataFrameMapper' is not defined
Trying:
mapper5.fit_transform(data)
Expecting:
array([[1.38629436],
[1.79175947],
[1.09861229],
[1.09861229],
[0.69314718],
[1.09861229],
[1.60943791],
[1.38629436]])
**********************************************************************
File "README.rst", line 492, in README.rst
Failed example:
mapper5.fit_transform(data)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.12/doctest.py", line 1368, in __run
exec(compile(example.source, filename, "single",
File "<doctest README.rst[69]>", line 1, in <module>
mapper5.fit_transform(data)
^^^^^^^
NameError: name 'mapper5' is not defined
Trying:
import logging
Expecting nothing
ok
Trying:
logging.getLogger('sklearn_pandas').setLevel(logging.INFO)
Expecting nothing
ok
**********************************************************************
1 items had failures:
49 of 72 in README.rst
72 tests in 1 items.
23 passed and 49 failed.
***Test Failed*** 49 failures.
E: pybuild pybuild:389: test: plugin distutils failed with: exit code=1: cd
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sklearn-pandas/build; python3.12 -m
pytest ; cd {dir}; python{version} -m doctest -v README.rst
rm -fr -- /tmp/dh-xdg-rundir-gmPWMRsi
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.12
returned exit code 13
make: *** [debian/rules:7: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202410/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
