Hi,
On 2023-12-12 13:48, Graham Inggs wrote:
Source: prody
Version: 2.3.1+dfsg-3
Severity: serious
Tags: sid trixie
User: debian...@lists.debian.org
Usertags: regression
Hi Maintainer
The autopkgtest of prody 2.3.1+dfsg-3 is failing when tested with
numpy 1:1.24.2-2 [1]. I've copied what I hope is the relevant part of
the log below.
[...]
345s E AssertionError:
345s E Arrays are not equal
345s E hessian is not symmetric
345s E Mismatched elements: 6 / 51984 (0.0115%)
345s E Max absolute difference: 4.4408921e-16
345s E Max relative difference: 7.83963072e-16
345s E x: array([[ 6.913751, 0.021868, 0.94014 , ..., 0. , 0. ,
345s E 0. ],
345s E [ 0.021868, 9.066915, -0.076779, ..., 0. , 0. ,...
345s E y: array([[ 6.913751, 0.021868, 0.94014 , ..., 0. , 0. ,
345s E 0. ],
345s E [ 0.021868, 9.066915, -0.076779, ..., 0. , 0. ,...
I think the issue here is with the tolerance of the equality criterion.
Maximum absolute difference nowhere exceeds 1e-14, thus lowering the
tolerance should with the failure. I am not sure how to adjust the
frequency in this particular case, but I will give it a look when I have
time.
Thanks,
Andrius
