Package: src:python-bx
Version: 0.9.0-1
Severity: important
Tags: sid trixie
User: [email protected]
Usertags: python3.12
Error compiling Cython file:
------------------------------------------------------------
...
#p_rval[i] = NIB_I2C_TABLE[ p_data[0] & 0xF ]
p_rval[i] = NIB_I2C_TABLE_SECOND[ p_data[0] ]
p_data = p_data + 1
i = 1
# Two output values for each input value
for j from 0 <= j < (length-i)/2:
^
------------------------------------------------------------
lib/bx/seq/_nib.pyx:45:34: Cannot assign type 'double' to 'int'
Compiling lib/bx/seq/_nib.pyx because it changed.
[1/1] Cythonizing lib/bx/seq/_nib.pyx
Traceback (most recent call last):
File "/<<PKGBUILDDIR>>/setup.py", line 193, in <module>
main()
File "/<<PKGBUILDDIR>>/setup.py", line 37, in main
setup(**metadata)
File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line
107, in setup
return distutils.core.setup(**attrs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py",
line 185, in setup
return run_commands(dist)
^^^^^^^^^^^^^^^^^^
File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py",
line 201, in run_commands
dist.run_commands()
File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py",
line 969, in run_commands
self.run_command(cmd)
File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233,
in run_command
super().run_command(command)
File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py",
line 988, in run_command
cmd_obj.run()
File
"/usr/lib/python3/dist-packages/setuptools/_distutils/command/build.py",
line 131, in run
self.run_command(cmd_name)
File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py",
line 318, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233,
in run_command
super().run_command(command)
File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py",
line 988, in run_command
cmd_obj.run()
File
"/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py",
line 345, in run
self.build_extensions()
File
"/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py",
line 467, in build_extensions
self._build_extensions_serial()
File
"/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py",
line 493, in _build_extensions_serial
self.build_extension(ext)
File "/usr/lib/python3/dist-packages/Cython/Distutils/build_ext.py",
line 130, in build_extension
new_ext = cythonize(
^^^^^^^^^^
File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py",
line 1154, in cythonize
cythonize_one(*args)
File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py",
line 1321, in cythonize_one
raise CompileError(None, pyx_file)
Cython.Compiler.Errors.CompileError: lib/bx/seq/_nib.pyx
E: pybuild pybuild:395: build: plugin distutils failed with: exit
code=1: /usr/bin/python3 setup.py build
dh_auto_build: error: pybuild --build -i python{version} -p "3.12 3.11"
returned exit code 13
