Source: r-bioc-sparsematrixstats
Version: 1.10.0+dfsg-1
Severity: serious
Justification: autopkgtest failure
Dear Maintainer,
The autopkgtest of your package fails with r-base (4.3.1-1):
74s [ FAIL 1 | WARN 1 | SKIP 21 | PASS 1753 ]
74s
74s ══ Skipped tests
═══════════════════════════════════════════════════════════════
74s • different result than matrixStats version, because sparseMatrixStats
uses `interpolate=FALSE`. (10)
74s • matrixStats doesn't convert values to logical if mat is logical?! (1)
74s • matrixStats::xxxOrderStats() does not support missing values (10)
74s
74s ══ Failed tests
════════════════════════════════════════════════════════════════
74s ── Error ('test-logicals.R:88'): colQuantiles works
────────────────────────────
74s Error in `h(simpleError(msg, call))`: error in evaluating the argument 'x'
in selecting a method for function 't': values must be type 'logical',
74s but FUN(X[[1]]) result is type 'double'
74s Backtrace:
74s ▆
74s 1. ├─testthat::expect_equal(...) at test-logicals.R:88:2
74s 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
74s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
74s 4. ├─MatrixGenerics::colQuantiles(sp_mat, type = 1)
74s 5. ├─sparseMatrixStats::colQuantiles(sp_mat, type = 1)
74s 6. │ └─sparseMatrixStats (local) .local(x, rows, cols, probs, na.rm,
type, ..., useNames, drop)
74s 7. │ ├─base::t(...)
74s 8. │
└─sparseMatrixStats:::expand_and_reduce_sparse_matrix_to_matrix(...)
74s 9. │ └─base::vapply(...)
74s 10. └─base::.handleSimpleError(...)
74s 11. └─base (local) h(simpleError(msg, call))
74s
74s [ FAIL 1 | WARN 1 | SKIP 21 | PASS 1753 ]
https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-bioc-sparsematrixstats/34918495/log.gz
