Source: numba Version: 0.56.4+dfsg-2 Severity: serious Control: tags -1 bookworm-ignore User: debian...@lists.debian.org Usertags: regression
Dear maintainer(s),Your package has an autopkgtest, great. However, as mentioned in bug #1020445 message 19 it fails since around September 2022 everywhere except amd64 (where it only finishes before timeout on our most powerful host). Can you please investigate the situation and fix it? I copied some of the output on arm64 at the bottom of this report, other architectures have different issues thought.
The release team has announced [1] that failing autopkgtest on amd64 and arm64 are considered RC in testing. [Release Team member hat on] Because we're currently in the hard freeze for bookworm, I have marked this bug as bookworm-ignore. Targeted fixes are still welcome.
More information about this bug and the reason for filing it can be found on https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul [1] https://lists.debian.org/debian-devel-announce/2019/07/msg00002.html https://ci.debian.net/data/autopkgtest/testing/arm64/n/numba/32471152/log.gz Fatal Python error: Segmentation fault Current thread 0x0000ffff946c96e0 (most recent call first): File "/usr/lib/python3.11/unittest/case.py", line 579 in _callTestMethod File "/usr/lib/python3.11/unittest/case.py", line 623 in run File "/usr/lib/python3.11/unittest/case.py", line 678 in __call__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 665 in __call__
File "/usr/lib/python3.11/multiprocessing/pool.py", line 125 in worker File "/usr/lib/python3.11/multiprocessing/process.py", line 108 in runFile "/usr/lib/python3.11/multiprocessing/process.py", line 314 in _bootstrap File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 71 in _launch File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 19 in __init__
File "/usr/lib/python3.11/multiprocessing/context.py", line 281 in _Popen File "/usr/lib/python3.11/multiprocessing/process.py", line 121 in startFile "/usr/lib/python3.11/multiprocessing/pool.py", line 329 in _repopulate_pool_static File "/usr/lib/python3.11/multiprocessing/pool.py", line 306 in _repopulate_pool
File "/usr/lib/python3.11/multiprocessing/pool.py", line 215 in __init__ File "/usr/lib/python3.11/multiprocessing/context.py", line 119 in PoolFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 742 in _run_inner
File "/usr/lib/python3.11/unittest/runner.py", line 217 in runFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 796 in run
File "/usr/lib/python3.11/unittest/main.py", line 274 in runTestsFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 326 in run_tests_real File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 341 in runTests
File "/usr/lib/python3.11/unittest/main.py", line 102 in __init__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 168 in __init__ File "/usr/lib/python3/dist-packages/numba/testing/__init__.py", line 54 in run_tests File "/usr/lib/python3/dist-packages/numba/testing/_runtests.py", line 25 in _main File "/usr/lib/python3/dist-packages/numba/runtests.py", line 9 in <module>
File "<frozen runpy>", line 88 in _run_code File "<frozen runpy>", line 198 in _run_module_as_mainExtension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, numba.core.typeconv._typeconv, numba._helperlib, numba._dynfunc, numba._dispatcher, numba.core.runtime._nrt_python, numba.np.ufunc._internal, numba.experimental.jitclass._box, scipy._lib._ccallback_c, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg._cythonized_array_utils, scipy.linalg._flinalg, scipy.linalg._solve_toeplitz, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_lapack, scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm, scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools, scipy.sparse._csparsetools, scipy.sparse.linalg._isolve._iterative, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, zmq.backend.cython.context, zmq.backend.cython.message, zmq.backend.cython.socket, zmq.backend.cython._device, zmq.backend.cython._poll, zmq.backend.cython._proxy_steerable, zmq.backend.cython._version, zmq.backend.cython.error, zmq.backend.cython.utils, tornado.speedups, numpy.core._umath_tests, _cffi_backend, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.special._ellip_harm_2, scipy.special.cython_special, numba.mviewbuf, psutil._psutil_linux, psutil._psutil_posix, numpy.linalg.lapack_lite (total: 66)
Fatal Python error: Segmentation fault Current thread 0x0000ffff946c96e0 (most recent call first):File "/usr/lib/python3/dist-packages/numba/tests/doc_examples/test_typed_list_usage.py", line 34 in test_ex_inferred_list_jit
File "/usr/lib/python3.11/unittest/case.py", line 579 in _callTestMethod File "/usr/lib/python3.11/unittest/case.py", line 623 in run File "/usr/lib/python3.11/unittest/case.py", line 678 in __call__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 665 in __call__
File "/usr/lib/python3.11/multiprocessing/pool.py", line 125 in worker File "/usr/lib/python3.11/multiprocessing/process.py", line 108 in runFile "/usr/lib/python3.11/multiprocessing/process.py", line 314 in _bootstrap File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 71 in _launch File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 19 in __init__
File "/usr/lib/python3.11/multiprocessing/context.py", line 281 in _Popen File "/usr/lib/python3.11/multiprocessing/process.py", line 121 in startFile "/usr/lib/python3.11/multiprocessing/pool.py", line 329 in _repopulate_pool_static File "/usr/lib/python3.11/multiprocessing/pool.py", line 306 in _repopulate_pool
File "/usr/lib/python3.11/multiprocessing/pool.py", line 215 in __init__ File "/usr/lib/python3.11/multiprocessing/context.py", line 119 in PoolFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 742 in _run_inner
File "/usr/lib/python3.11/unittest/runner.py", line 217 in runFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 796 in run
File "/usr/lib/python3.11/unittest/main.py", line 274 in runTestsFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 326 in run_tests_real File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 341 in runTests
File "/usr/lib/python3.11/unittest/main.py", line 102 in __init__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 168 in __init__ File "/usr/lib/python3/dist-packages/numba/testing/__init__.py", line 54 in run_tests File "/usr/lib/python3/dist-packages/numba/testing/_runtests.py", line 25 in _main File "/usr/lib/python3/dist-packages/numba/runtests.py", line 9 in <module>
File "<frozen runpy>", line 88 in _run_code File "<frozen runpy>", line 198 in _run_module_as_mainExtension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, numba.core.typeconv._typeconv, numba._helperlib, numba._dynfunc, numba._dispatcher, numba.core.runtime._nrt_python, numba.np.ufunc._internal, numba.experimental.jitclass._box, scipy._lib._ccallback_c, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg._cythonized_array_utils, scipy.linalg._flinalg, scipy.linalg._solve_toeplitz, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_lapack, scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm, scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools, scipy.sparse._csparsetools, scipy.sparse.linalg._isolve._iterative, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, zmq.backend.cython.context, zmq.backend.cython.message, zmq.backend.cython.socket, zmq.backend.cython._device, zmq.backend.cython._poll, zmq.backend.cython._proxy_steerable, zmq.backend.cython._version, zmq.backend.cython.error, zmq.backend.cython.utils, tornado.speedups, numpy.core._umath_tests, _cffi_backend, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.special._ellip_harm_2, scipy.special.cython_special, numba.mviewbuf, psutil._psutil_linux, psutil._psutil_posix (total: 65)
Fatal Python error: Segmentation fault Current thread 0x0000ffff946c96e0 (most recent call first):File "/usr/lib/python3/dist-packages/numba/tests/doc_examples/test_typed_dict_usage.py", line 100 in test_ex_inferred_dict_njit
File "/usr/lib/python3.11/unittest/case.py", line 579 in _callTestMethod File "/usr/lib/python3.11/unittest/case.py", line 623 in run File "/usr/lib/python3.11/unittest/case.py", line 678 in __call__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 665 in __call__
File "/usr/lib/python3.11/multiprocessing/pool.py", line 125 in worker File "/usr/lib/python3.11/multiprocessing/process.py", line 108 in runFile "/usr/lib/python3.11/multiprocessing/process.py", line 314 in _bootstrap File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 71 in _launch File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 19 in __init__
File "/usr/lib/python3.11/multiprocessing/context.py", line 281 in _Popen File "/usr/lib/python3.11/multiprocessing/process.py", line 121 in startFile "/usr/lib/python3.11/multiprocessing/pool.py", line 329 in _repopulate_pool_static File "/usr/lib/python3.11/multiprocessing/pool.py", line 306 in _repopulate_pool
File "/usr/lib/python3.11/multiprocessing/pool.py", line 215 in __init__ File "/usr/lib/python3.11/multiprocessing/context.py", line 119 in PoolFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 742 in _run_inner
File "/usr/lib/python3.11/unittest/runner.py", line 217 in runFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 796 in run
File "/usr/lib/python3.11/unittest/main.py", line 274 in runTestsFile "/usr/lib/python3/dist-packages/numba/testing/main.py", line 326 in run_tests_real File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 341 in runTests
File "/usr/lib/python3.11/unittest/main.py", line 102 in __init__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 168 in __init__ File "/usr/lib/python3/dist-packages/numba/testing/__init__.py", line 54 in run_tests File "/usr/lib/python3/dist-packages/numba/testing/_runtests.py", line 25 in _main File "/usr/lib/python3/dist-packages/numba/runtests.py", line 9 in <module>
File "<frozen runpy>", line 88 in _run_code File "<frozen runpy>", line 198 in _run_module_as_mainExtension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, numba.core.typeconv._typeconv, numba._helperlib, numba._dynfunc, numba._dispatcher, numba.core.runtime._nrt_python, numba.np.ufunc._internal, numba.experimental.jitclass._box, scipy._lib._ccallback_c, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg._cythonized_array_utils, scipy.linalg._flinalg, scipy.linalg._solve_toeplitz, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_lapack, scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm, scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools, scipy.sparse._csparsetools, scipy.sparse.linalg._isolve._iterative, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, zmq.backend.cython.context, zmq.backend.cython.message, zmq.backend.cython.socket, zmq.backend.cython._device, zmq.backend.cython._poll, zmq.backend.cython._proxy_steerable, zmq.backend.cython._version, zmq.backend.cython.error, zmq.backend.cython.utils, tornado.speedups, numpy.core._umath_tests, _cffi_backend, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.special._ellip_harm_2, scipy.special.cython_special, numba.mviewbuf, psutil._psutil_linux, psutil._psutil_posix, numpy.linalg.lapack_lite (total: 66) test_ex_initial_value_list_compile_time_consts (numba.tests.doc_examples.test_literal_container_usage.DocsLiteralContainerUsageTest.test_ex_initial_value_list_compile_time_consts) ... ok test_ex_literal_dict_compile_time_consts (numba.tests.doc_examples.test_literal_container_usage.DocsLiteralContainerUsageTest.test_ex_literal_dict_compile_time_consts) ... ok test_ex_literal_list (numba.tests.doc_examples.test_literal_container_usage.DocsLiteralContainerUsageTest.test_ex_literal_list) ... ok test_ex_jitclass (numba.tests.doc_examples.test_jitclass.DocsJitclassUsageTest.test_ex_jitclass) ... ok
Fatal Python error: Segmentation fault Current thread 0x0000ffff8516f1a0 (most recent call first):File "/usr/lib/python3/dist-packages/numba/typed/typedlist.py", line 345 in append File "/usr/lib/python3/dist-packages/numba/tests/doc_examples/test_typed_list_usage.py", line 87 in test_ex_nested_list
File "/usr/lib/python3.11/unittest/case.py", line 579 in _callTestMethod File "/usr/lib/python3.11/unittest/case.py", line 623 in run File "/usr/lib/python3.11/unittest/case.py", line 678 in __call__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 665 in __call__
File "/usr/lib/python3.11/multiprocessing/pool.py", line 125 in worker File "/usr/lib/python3.11/multiprocessing/process.py", line 108 in runFile "/usr/lib/python3.11/multiprocessing/process.py", line 314 in _bootstrap File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 71 in _launch File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 19 in __init__
File "/usr/lib/python3.11/multiprocessing/context.py", line 281 in _Popen File "/usr/lib/python3.11/multiprocessing/process.py", line 121 in startFile "/usr/lib/python3.11/multiprocessing/pool.py", line 329 in _repopulate_pool_static File "/usr/lib/python3.11/multiprocessing/pool.py", line 340 in _maintain_pool File "/usr/lib/python3.11/multiprocessing/pool.py", line 516 in _handle_workers
File "/usr/lib/python3.11/threading.py", line 975 in run File "/usr/lib/python3.11/threading.py", line 1038 in _bootstrap_inner File "/usr/lib/python3.11/threading.py", line 995 in _bootstrapExtension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, numba.core.typeconv._typeconv, numba._helperlib, numba._dynfunc, numba._dispatcher, numba.core.runtime._nrt_python, numba.np.ufunc._internal, numba.experimental.jitclass._box, scipy._lib._ccallback_c, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg._cythonized_array_utils, scipy.linalg._flinalg, scipy.linalg._solve_toeplitz, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_lapack, scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm, scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools, scipy.sparse._csparsetools, scipy.sparse.linalg._isolve._iterative, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, zmq.backend.cython.context, zmq.backend.cython.message, zmq.backend.cython.socket, zmq.backend.cython._device, zmq.backend.cython._poll, zmq.backend.cython._proxy_steerable, zmq.backend.cython._version, zmq.backend.cython.error, zmq.backend.cython.utils, tornado.speedups, numpy.core._umath_tests, _cffi_backend, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.special._ellip_harm_2, scipy.special.cython_special, numba.mviewbuf, psutil._psutil_linux, psutil._psutil_posix (total: 65)
Fatal Python error: Bus error Current thread 0x0000ffff8516f1a0 (most recent call first): File "/usr/lib/python3.11/unittest/case.py", line 579 in _callTestMethod File "/usr/lib/python3.11/unittest/case.py", line 623 in run File "/usr/lib/python3.11/unittest/case.py", line 678 in __call__File "/usr/lib/python3/dist-packages/numba/testing/main.py", line 665 in __call__
File "/usr/lib/python3.11/multiprocessing/pool.py", line 125 in worker File "/usr/lib/python3.11/multiprocessing/process.py", line 108 in runFile "/usr/lib/python3.11/multiprocessing/process.py", line 314 in _bootstrap File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 71 in _launch File "/usr/lib/python3.11/multiprocessing/popen_fork.py", line 19 in __init__
File "/usr/lib/python3.11/multiprocessing/context.py", line 281 in _Popen File "/usr/lib/python3.11/multiprocessing/process.py", line 121 in startFile "/usr/lib/python3.11/multiprocessing/pool.py", line 329 in _repopulate_pool_static File "/usr/lib/python3.11/multiprocessing/pool.py", line 340 in _maintain_pool File "/usr/lib/python3.11/multiprocessing/pool.py", line 516 in _handle_workers
File "/usr/lib/python3.11/threading.py", line 975 in run File "/usr/lib/python3.11/threading.py", line 1038 in _bootstrap_inner File "/usr/lib/python3.11/threading.py", line 995 in _bootstrapExtension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, numba.core.typeconv._typeconv, numba._helperlib, numba._dynfunc, numba._dispatcher, numba.core.runtime._nrt_python, numba.np.ufunc._internal, numba.experimental.jitclass._box, scipy._lib._ccallback_c, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg._cythonized_array_utils, scipy.linalg._flinalg, scipy.linalg._solve_toeplitz, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_lapack, scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm, scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools, scipy.sparse._csparsetools, scipy.sparse.linalg._isolve._iterative, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, zmq.backend.cython.context, zmq.backend.cython.message, zmq.backend.cython.socket, zmq.backend.cython._device, zmq.backend.cython._poll, zmq.backend.cython._proxy_steerable, zmq.backend.cython._version, zmq.backend.cython.error, zmq.backend.cython.utils, tornado.speedups, numpy.core._umath_tests, _cffi_backend, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.special._ellip_harm_2, scipy.special.cython_special, numba.mviewbuf, psutil._psutil_linux, psutil._psutil_posix (total: 65) test_floordiv_float (numba.tests.npyufunc.test_errors.TestFloatingPointExceptions.test_floordiv_float) ... ok
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