On 9/11/21 12:27 PM, Andreas Tille wrote: > Hi, > > the blockers mentioned below are done now. Those who have some > spare time might like to continue with the transition. I will > not contribute relevant things until Tuesday.
I did few uploads to get the transition moving forward. Current blocker is for r-bioc-biocsingular which needs r-bioc-scaledmatrix and the latter is still in NEW. For scaledmatrix, I've asked already on the #-ftp IRC as well, hopefully it gets proc soon. This is blocking a few packages, but I'm in the process of uploading the rest which are not directly uploaded. Will upload a few packages tomorrow as well. > There is one thing I would love to be solved soon: I just cheated > with the test suite of biomformat in this patch: > > > https://salsa.debian.org/r-pkg-team/r-bioc-biomformat/-/blob/master/debian/patches/fixme_disable_test_for_the_moment.patch Looking at the error, and also at the calls for those, they are called with `suppressWarnings(read_biom(min_sparse_hdf5))` So probably the file was not good already, since it explicitly tries to suppress warnings. _*Maybe*_ in this release, there were a few changes that rendered the file unusable to for analysis. To me, it does not appear high priority. > I would love if somebody could find a fix - may be by discussing > with upstream. No time, sorry :) Cheers, -- Nilesh Patra Debian Developer, Uploading ⢀⣴⠾⠻⢶⣦⠀ ⣾⠁⢠⠒⠀⣿⡁ ⢿⡄⠘⠷⠚⠋ nil...@debian.org / nileshpatra.info / tchncs.de ⠈⠳⣄
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