Package: wnpp Severity: wishlist Subject: ITP: mecat2 -- ultra-fast and accurate de novo assembly tools for SMRT reads Package: wnpp Owner: Shayan Doust <he...@shayandoust.me> Severity: wishlist
* Package name : mecat2 Version : 0.0+git20200428.f54c542 Upstream Author : Chuan-Le Xiao * URL : https://github.com/xiaochuanle/MECAT2 * License : GPL-3 Programming Lang: C Description : ultra-fast and accurate de novo assembly tools for SMRT reads An improved version of MECAT. It is an ultra-fast and accurate mapping and error correcting de novo assembly tools for single molecula sequencing (SMRT) reads. MECAT2 consists of the following three modules: 1. mecat2map: a fast and accurate alignment tool for SMRT reads. 2. mecat2cns: correct noisy reads based on their pairwise overlaps. 3. fsa: a string graph based assembly tool. Remark: This package is maintained by Debian Med Packaging Team at https://salsa.debian.org/med-team/mecat2
