Package: wnpp Severity: wishlist Subject: ITP: libpll-2 -- Phylogenetic Likelihood Library 2 Package: wnpp Owner: Shayan Doust <he...@shayandoust.me> Severity: wishlist
* Package name : libpll-2 Version : 0.3.2 Upstream Author : Tomas Flouri * URL : https://github.com/xflouris/libpll-2 * License : AGPL-3+ Programming Lang: C Description : Phylogenetic Likelihood Library 2 PLL is a highly optimised, parallelised software library to ease the development of new software tools dealing with phylogenetic inference. . Among the function included in PLL are parsing multiple sequence alignments (MSA) from PHYLIP and FASTA files, reading Newick trees, performing topological moves such as SPR and NNI, model optimisation, likelihood evaluation and partitioned analysis by assigning different substitution models to each partition of the MSA. PLL fully implements the GTR nucleotide substitution model for DNA data and a number of models for aminoacid data. . libpll-2 is the new official fork of libpll. It implements site repeats to speed up computations. . This package contains the dynamic library. Remark: This package is maintained by Debian Med Packaging Team at https://salsa.debian.org/med-team/libpll-2
