Source: nipy Followup-For: Bug #959138 User: ubuntu-de...@lists.ubuntu.com Usertags: origin-ubuntu groovy ubuntu-patch
Dear Maintainer, While working on numpy proposed-migration for groovy, I realize nipy autopkgtest was failing. It appears that numpy changed the pass to the module decorators from numpy.testing.decorators to numpy.testing._private.decorators. In Ubuntu, the attached patch was applied allowing nipy to pass autopkg test and migrate from groovy-proposed to groovy. The Changelog below was added to nipy-0.4.2-3ubuntu1 * Resolved test failure due to numpy 1:1.18.4-1. (Closes: #959138) Thanks for considering the patch. -- System Information: Debian Release: bullseye/sid APT prefers focal-updates APT policy: (500, 'focal-updates'), (500, 'focal-security'), (500, 'focal'), (100, 'focal-backports') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 5.4.0-29-generic (SMP w/8 CPU cores) Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled
Description: Fix Autopkgtest failure caused by the new numpy 1:1.18.4-1 Author: Matthieu Clemenceau <matthieu.clemenc...@canonical.com> Origin: vendor Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=959138#5 Forwarded: yes Last-Update: 2020-05-15 --- a/nipy/algorithms/clustering/tests/test_vmm.py +++ b/nipy/algorithms/clustering/tests/test_vmm.py @@ -13,7 +13,7 @@ select_vmm_cv) from nose.tools import assert_true, assert_equal -from numpy.testing import decorators +from numpy.testing._private import decorators from nibabel.optpkg import optional_package --- a/nipy/algorithms/diagnostics/tests/test_screen.py +++ b/nipy/algorithms/diagnostics/tests/test_screen.py @@ -23,7 +23,8 @@ from nose.tools import (assert_true, assert_false, assert_equal, assert_raises) from numpy.testing import (assert_array_equal, assert_array_almost_equal, - assert_almost_equal, decorators) + assert_almost_equal) +from numpy.testing._private import decorators from nipy.testing import funcfile from nipy.testing.decorators import needs_mpl_agg --- a/nipy/fixes/numpy/testing/nosetester.py +++ b/nipy/fixes/numpy/testing/nosetester.py @@ -21,7 +21,7 @@ Examples -------- - >>> from numpy.testing import nosetester + >>> from numpy.testing._private import nosetester >>> nosetester.get_package_name('nonsense') 'numpy' --- a/nipy/testing/decorators.py +++ b/nipy/testing/decorators.py @@ -8,7 +8,7 @@ from __future__ import print_function from __future__ import absolute_import -from numpy.testing.decorators import * +from numpy.testing._private.decorators import * from nipy.utils import templates, example_data, DataError --- a/nipy/tests/test_scripts.py +++ b/nipy/tests/test_scripts.py @@ -19,7 +19,9 @@ from nose.tools import assert_true, assert_false, assert_equal, assert_raises from ..testing import funcfile -from numpy.testing import decorators, assert_almost_equal + +from numpy.testing._private import decorators +from numpy.testing import assert_almost_equal from nipy.testing.decorators import make_label_dec
