Package: src:toil
Version: 3.18.0-2
Severity: important
Tags: sid buster
According to
https://ci.debian.net/data/packages/unstable/amd64/t/toil/latest-autopkgtest/log.gz
the tests fail with:
Traceback (most recent call last):
File "/usr/bin/toil-cwl-runner", line 11, in <module>
load_entry_point('toil==3.18.0', 'console_scripts', 'toil-cwl-runner')()
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 487, in
load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 2728, in
load_entry_point
return ep.load()
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 2346, in
load
return self.resolve()
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 2352, in
resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/usr/lib/python3/dist-packages/toil/cwl/cwltoil.py", line 46, in
<module>
import cwltool.load_tool
File "/usr/lib/python3/dist-packages/cwltool/load_tool.py", line 24, in
<module>
from . import process, update
File "/usr/lib/python3/dist-packages/cwltool/process.py", line 33, in <module>
from . import expression
File "/usr/lib/python3/dist-packages/cwltool/expression.py", line 14, in
<module>
from .sandboxjs import default_timeout, execjs, JavascriptException
File "/usr/lib/python3/dist-packages/cwltool/sandboxjs.py", line 20, in
<module>
from .utils import json_dumps, onWindows, processes_to_kill, subprocess
File "/usr/lib/python3/dist-packages/cwltool/utils.py", line 18, in <module>
from mypy_extensions import TypedDict
ModuleNotFoundError: No module named 'mypy_extensions'
