control: reassign -1 python-cogent control: notfound -1 matplotlib/2.2.3-2
this is something to fix in cogent test suite (they even got expected/observed reverted...) On Fri, Dec 7, 2018 at 3:39 PM Paul Gevers <elb...@debian.org> wrote: > > Source: matplotlib, python-cogent > Control: found -1 matplotlib/2.2.3-2 > Control: found -1 python-cogent/1.9-12 > X-Debbugs-CC: debian...@lists.debian.org > User: debian...@lists.debian.org > Usertags: breaks needs-update > > Dear maintainers, > > With a recent upload of matplotlib the autopkgtest of python-cogent > fails in testing when that autopkgtest is run with the binary packages > of matplotlib from unstable. It passes when run with only packages from > testing. In tabular form: > pass fail > matplotlib from testing 2.2.3-2 > python-cogent from testing 1.9-12 > all others from testing from testing > > I copied some of the output at the bottom of this report. Interestingly > enough, the test passed with 2.2.3-1, in contrast to the other packages > at that time. > > Currently this regression is contributing to the delay of the migration > of matplotlib to testing [1]. Due to the nature of this issue, I filed > this bug report against both packages. Can you please investigate the > situation and reassign the bug to the right package? If needed, please > change the bug's severity. > > More information about this bug and the reason for filing it can be found on > https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation > > Paul > > [1] https://qa.debian.org/excuses.php?package=matplotlib > > https://ci.debian.net/data/autopkgtest/testing/amd64/p/python-cogent/1451883/log.gz > > autopkgtest [11:48:18]: test run-unit-test: [----------------------- > bwa can be tested on amd64 arch > lolo > Can't find formatdb executable: skipping test > Can't find blastall executable: skipping test > Can't find blat executable: skipping test > Can't find bwa executable: skipping test > Can't find carnac executable: skipping test > Can't find cdbfasta executable: skipping test > Can't find clearcut executable: skipping test > Can't find cmfinder.pl executable: skipping test > Can't find comrna executable: skipping test > Can't find contrafold executable: skipping test > Can't find covea executable: skipping test > Can't find dialign2-2 executable: skipping test > Can't find dynalign executable: skipping test > Can't find FastTree executable: skipping test > Can't find foldalign executable: skipping test > Can't find guppy executable: skipping test > Can't find ilm executable: skipping test > Can't find knetfold.pl executable: skipping test > Can't find mfold executable: skipping test > Can't find muscle executable: skipping test > Can't find msms executable: skipping test > Can't find pplacer executable: skipping test > Can't find rdp_classifier-2.2.jar executable: skipping test > Can't find rdp_classifier-2.0.jar executable: skipping test > Can't find Fold.out executable: skipping test > Can't find findphyl executable: skipping test > Can't find pknotsRG-1.2-i386-linux-static executable: skipping test > Can't find RNAalifold executable: skipping test > Can't find rnaview executable: skipping test > Can't find RNAfold executable: skipping test > Can't find sfold.X86_64.LINUX executable: skipping test > Can't find stride executable: skipping test > Can't find hybrid-ss-min executable: skipping test > Can't find cd-hit executable: skipping test > Can't find calculate_likelihood executable: skipping test > Can't find sfffile executable: skipping test > Can't find sffinfo executable: skipping test > Can't find uclust executable: skipping test > Can't find usearch executable: skipping test > Environment variable TEST_DB=1 not set: skipping db tests > ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../usr/lib/python2.7/dist-packages/matplotlib/tight_layout.py:182: > UserWarning: The bottom and top margins cannot be made large enough to > accommodate all axes decorations. > warnings.warn('The bottom and top margins cannot be made large ' > F............ > ====================================================================== > FAIL: test_set_figure_size_long_labels > (test_draw.test_distribution_plots.DistributionPlotsTests) > Test setting a figure size that has really long labels. > ---------------------------------------------------------------------- > Traceback (most recent call last): > File > "/tmp/autopkgtest-lxc.gcsqih4m/downtmp/autopkgtest_tmp/tests/test_draw/test_distribution_plots.py", > line 511, in test_set_figure_size_long_labels > "Warning: could not automatically resize plot to make room for " > File "/usr/lib/python2.7/dist-packages/cogent/util/unit_test.py", line > 316, in failUnlessEqual > (msg or 'Got %s, but expected %s' % (`observed`, `expected`)) > AssertionError: Got '', but expected "Warning: could not automatically > resize plot to make room for axes labels and plot title. This can happen > if the labels or title are extremely long and the plot size is too > small. Your plot may have its labels and/or title cut-off. To fix this, > try increasing the plot's size (in inches) and try again." > > ---------------------------------------------------------------------- > Ran 3527 tests in 54.981s > > FAILED (failures=1) > autopkgtest [11:49:16]: test run-unit-test: -----------------------] > -- Sandro "morph" Tosi My website: http://sandrotosi.me/ Me at Debian: http://wiki.debian.org/SandroTosi G+: https://plus.google.com/u/0/+SandroTosi
