Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org>
* Package name : phast Version : 1.4 Upstream Author : Ritika Ramani <rram...@cshl.edu> * URL : http://compgen.cshl/edu/phast * License : BSD Programming Lang: C Description : phylogenetic analysis with space/time models PHAST is a software package for comparative and evolutionary genomics. It consists of about half a dozen major programs, plus more than a dozen utilities for manipulating sequence alignments, phylogenetic trees, and genomic annotations. For the most part, PHAST focuses on two kinds of applications: the identification of novel functional elements, including protein-coding exons and evolutionarily conserved sequences; and statistical phylogenetic modeling, including estimation of model parameters, detection of signatures of selection, and reconstruction of ancestral sequences. . PHAST does not support phylogeny reconstruction or sequence alignment, and it is designed for use with DNA sequences only (see Comparison). Remark: This package will be maintained by the Debian Med team at https://anonscm.debian.org/git/debian-med/phast.git
