On Thu, 1 Jun 2017 10:39:37 +0200 Johannes Ring <joha...@simula.no>
wrote:
> On Thu, Jun 1, 2017 at 10:24 AM, Drew Parsons <dpars...@debian.org>
wrote:
> > Should the vtk section in UseDOLFIN.cmake be controlled with some
> > python3 test, so VTK is still pulled in for python2?
>
> Yes, we can do that, although I believe the vtk section in
> UseDOLFIN.cmake is not important. I will make a patch.
It's still failing, with python-ffc 2016.2.0-3 and libdolfin-dev
2016.2.0-4 (with UseDOLFIN.cmake patched).
In [4]: u = interpolate(Expression('x[0] + x[1]', degree=1), V)
Calling DOLFIN just-in-time (JIT) compiler, this may take some time.
--- Instant: compiling ---
In instant.import_module_directly: Failed to import module
'dolfin_ee8f3791ac0429f005de8924557ccde25f2d90f2' from
'/home/drew/.cache/instant/python3.5/cache/dolfin_ee8f3791ac0429f005de8924557ccde25f2d90f2';
ImportError:dynamic module does not define module export function
(PyInit__dolfin_ee8f3791ac0429fd87a23c24557ccde25f2d90f2);
Failed to import module found in cache. Modulename:
'dolfin_ee8f3791ac0429fd87a23c24557ccde25f2d90f2';
Path:
'/home/useruser/.cache/instant/python3.5/cache/dolfin_ee8f3791ac0429fd87a23c24557ccde25f2d90f2';
ImportError:dynamic module does not define module export function
(PyInit__dolfin_ee8f3791ac0429fd87a23c24557ccde25f2d90f2);
---------------------------------------------------------------------------
AssertionError Traceback (most recent call last)
<ipython-input-4-e06382777336> in <module>()
----> 1 u = interpolate(Expression('x[0] + x[1]', degree=1), V)
/usr/lib/python3/dist-packages/dolfin/functions/expression.py in __new__(cls,
cppcode, *args, **kwargs)
652 cpp_base, members = compile_expressions([cppcode],
653
[generic_function_members],
--> 654
mpi_comm=kwargs.get("mpi_comm"))
655 cpp_base, members = cpp_base[0], members[0]
656
/usr/lib/python3/dist-packages/dolfin/compilemodules/expressions.py in
compile_expressions(cppargs, generic_function_members, mpi_comm)
212 "\n\n".join(code_snippets), classnames,
213 additional_declarations="\n".join(additional_declarations),
--> 214 mpi_comm=mpi_comm)
215
216 return expression_classes, all_members
/usr/lib/python3/dist-packages/dolfin/compilemodules/expressions.py in
compile_expression_code(code, classnames, module_name, additional_declarations,
mpi_comm)
139 compiled_module = compile_extension_module(
140 code, additional_declarations=additional_declarations,
--> 141 mpi_comm=mpi_comm)
142
143 # Get the compiled class
/usr/lib/python3/dist-packages/dolfin/compilemodules/jit.py in mpi_jit(*args,
**kwargs)
66 # Just call JIT compiler when running in serial
67 if MPI.size(mpi_comm) == 1:
---> 68 return local_jit(*args, **kwargs)
69
70 # Compile first on process 0
/usr/lib/python3/dist-packages/dolfin/compilemodules/compilemodule.py in
compile_extension_module(code, module_name, additional_declarations,
additional_system_headers, mpi_comm, **instant_kwargs)
470 code=code,
471 additional_declarations=additional_declarations,
--> 472 **instant_kwargs)
473
474 sys.stdout.flush()
/usr/lib/python3/dist-packages/instant/build.py in build_module(modulename,
source_directory, code, init_code, additional_definitions,
additional_declarations, sources, wrap_headers, local_headers, system_headers,
include_dirs, library_dirs, libraries, swigargs, swig_include_dirs, cppargs,
lddargs, object_files, arrays, generate_interface, generate_setup,
cmake_packages, signature, cache_dir)
585
586 # Import module and place in memory cache
--> 587 module = import_and_cache_module(module_path, modulename,
moduleids)
588
589 if not module:
/usr/lib/python3/dist-packages/instant/cache.py in
import_and_cache_module(path, modulename, moduleids)
90 module, e = import_module_directly(path, modulename)
91 instant_assert(module is not None, "Failed to import module found
in cache. Modulename: '%s';\nPath: '%s';\n%s:%s;" % (modulename, path,
type(e).__name__,
---> 92
e))
93 for moduleid in moduleids:
94 place_module_in_memory_cache(moduleid, module)
/usr/lib/python3/dist-packages/instant/output.py in instant_assert(condition,
*message)
101 _log.error(*message)
102 text = message[0] % message[1:]
--> 103 raise AssertionError(text)
104
105
AssertionError: Failed to import module found in cache. Modulename:
'dolfin_ee8f3791ac0429fd87a23c24557ccde25f2d90f2';
Path:
'/home/user/.cache/instant/python3.5/cache/dolfin_ee8f3791ac0429fd87a23c24557ccde25f2d90f2';
ImportError:dynamic module does not define module export function
(PyInit__dolfin_ee8f3791ac0429fd87a23cd87a23c24557ccde25f2d90f2);
