Source: python-pbcore
Version: 0.5.2+dfsg-2
Affects: kineticstools
Hi Maintainer
Warnings are printed when pbcore.io is imported on ppc64el, as the
following transcript from a session on plummer.debian.org shows.
$ python
Python 2.7.13 (default, Jan 19 2017, 14:48:08)
[GCC 6.3.0 20170118] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> from pbcore.io import AlignmentSet
/usr/lib/python2.7/dist-packages/numpy/core/machar.py:127:
RuntimeWarning: overflow encountered in add
a = a + a
/usr/lib/python2.7/dist-packages/numpy/core/machar.py:129:
RuntimeWarning: invalid value encountered in subtract
temp1 = temp - a
/usr/lib/python2.7/dist-packages/numpy/core/machar.py:138:
RuntimeWarning: invalid value encountered in subtract
itemp = int_conv(temp-a)
/usr/lib/python2.7/dist-packages/numpy/core/machar.py:162:
RuntimeWarning: overflow encountered in add
a = a + a
/usr/lib/python2.7/dist-packages/numpy/core/machar.py:164:
RuntimeWarning: invalid value encountered in subtract
temp1 = temp - a
/usr/lib/python2.7/dist-packages/numpy/core/machar.py:171:
RuntimeWarning: invalid value encountered in subtract
if any(temp-a != zero):
>>>
These warnings appeared shortly after the h5py release candidates were
uploaded in January. They cause the autopkgtests of kineticstools on
ppc64el to fail due to the unexpected output.
Regards
Graham
