Package: release.debian.org Severity: normal User: release.debian....@packages.debian.org Usertags: unblock
Please unblock package ngs-sdk Just applied the patch provided for bug #859257. unblock ngs-sdk/1.3.0-2 -- System Information: Debian Release: 8.7 APT prefers stable-updates APT policy: (500, 'stable-updates'), (500, 'stable') Architecture: amd64 (x86_64) Kernel: Linux 3.16.0-4-amd64 (SMP w/1 CPU core) Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system)
diff -Nru ngs-sdk-1.3.0/debian/changelog ngs-sdk-1.3.0/debian/changelog --- ngs-sdk-1.3.0/debian/changelog 2016-11-09 08:54:53.000000000 +0100 +++ ngs-sdk-1.3.0/debian/changelog 2017-04-01 22:33:07.000000000 +0200 @@ -1,3 +1,11 @@ +ngs-sdk (1.3.0-2) unstable; urgency=medium + + * Fix install dir by using DEB_HOST_MULTIARCH instead of DEB_BUILD_GNU_TYPE + (thanks for the patch to Graham Inggs <gin...@debian.org>) + Closes: #859257 + + -- Andreas Tille <ti...@debian.org> Sat, 01 Apr 2017 22:33:07 +0200 + ngs-sdk (1.3.0-1) unstable; urgency=medium * New upstream release diff -Nru ngs-sdk-1.3.0/debian/rules ngs-sdk-1.3.0/debian/rules --- ngs-sdk-1.3.0/debian/rules 2016-11-09 08:54:53.000000000 +0100 +++ ngs-sdk-1.3.0/debian/rules 2017-04-01 22:33:07.000000000 +0200 @@ -8,9 +8,9 @@ OS := $(shell dpkg-architecture -qDEB_BUILD_ARCH_OS) CPU := $(shell dpkg-architecture -qDEB_BUILD_GNU_CPU) -BUILDTYPE := $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE) +MULTIARCH := $(shell dpkg-architecture -qDEB_HOST_MULTIARCH) # since build-results are not ending up in the proper dir its saver to use "*" instead of "$(CPU)" -SODIR := $(DEBPKGNAME)/$(BUILDTYPE)/$(DEBPKGNAME)/$(OS)/gcc/* +SODIR := $(DEBPKGNAME)/$(MULTIARCH)/$(DEBPKGNAME)/$(OS)/gcc/* build2vers := $(shell pyversions -sv) build3vers := $(shell py3versions -sv) @@ -23,19 +23,19 @@ # dh_auto_clean --sourcedirectory=$(DEBPKGNAME) ; \ dh_auto_clean ; \ fi - rm -rf ngs-java/$(BUILDTYPE) - rm -rf ngs-bam/$(BUILDTYPE) + rm -rf ngs-java/$(MULTIARCH) + rm -rf ngs-bam/$(MULTIARCH) rm -f ngs-bam/Makefile.config rm -f ngs-bam/Makefile.config.install.linux.x86_64.prl rm -f ngs-bam/Makefile.config.linux.x86_64 rm -f ngs-bam/reconfigure - rm -rf $(DEBPKGNAME)/$(BUILDTYPE) + rm -rf $(DEBPKGNAME)/$(MULTIARCH) rm -rf ngs-python/build override_dh_auto_configure: # # that's no standard configure script lacking support of default options \ - ./configure --build=$(BUILDTYPE) --prefix=/usr -- --source=1.7 + ./configure --build=$(MULTIARCH) --prefix=/usr -- --source=1.7 override_dh_auto_build: #dh_auto_build --sourcedirectory=$(DEBPKGNAME) @@ -43,7 +43,7 @@ dh_auto_build --sourcedirectory=$(DEBPKGNAME) # Remove ngs-bam generation, expects ngs-sdk and cannot find a way # to specify it - #cd ngs-bam && LD_LIBRARY_PATH=../$(SODIR)/rel/lib ./configure --build=$(BUILDTYPE) --prefix=/usr --with-ngs-sdk-prefix=../ngs-sdk + #cd ngs-bam && LD_LIBRARY_PATH=../$(SODIR)/rel/lib ./configure --build=$(MULTIARCH) --prefix=/usr --with-ngs-sdk-prefix=../ngs-sdk #dh_auto_build --sourcedirectory=ngs-bam dh_auto_build --sourcedirectory=ngs-java -- JAVAC="javac -source 1.7 -target 1.7" markdown_py -f README.html README.md @@ -52,8 +52,8 @@ make -C $(DEBPKGNAME)/test # Tests of Java binding disabled because need external lib ncbi-vdb, # not available in Debian at this time - #CLASSPATH=../$(BUILDTYPE)/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=$(SODIR)/rel/lib:$(LD_LIBRARY_PATH) make -C ngs-java/examples - #CLASSPATH=../$(BUILDTYPE)/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=../../$(SODIR)/rel/lib:$(LD_LIBRARY_PATH) make -C ngs-java/examples run_all + #CLASSPATH=../$(MULTIARCH)/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=$(SODIR)/rel/lib:$(LD_LIBRARY_PATH) make -C ngs-java/examples + #CLASSPATH=../$(MULTIARCH)/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=../../$(SODIR)/rel/lib:$(LD_LIBRARY_PATH) make -C ngs-java/examples run_all override_dh_auto_install: d-shlibmove --commit \ @@ -61,8 +61,8 @@ --devunversioned \ --exclude-a \ --exclude-la \ - --movedev "$(SODIR)/rel/lib/*.a*" usr/lib/$(BUILDTYPE) \ - --movedev "$(SODIR)/rel/ilib/*.a" usr/lib/$(BUILDTYPE) \ + --movedev "$(SODIR)/rel/lib/*.a*" usr/lib/$(MULTIARCH) \ + --movedev "$(SODIR)/rel/ilib/*.a" usr/lib/$(MULTIARCH) \ --movedev ngs-sdk/ngs usr/include \ $(SODIR)/rel/lib/libngs-sdk.so
