Source: mia Version: 2.4.3-2 Severity: serious Tags: stretch sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20161111 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > [ 97%] Generating mia-3drigidreg.1 > [ 97%] Built target mia-3dtrackpixelmovement-xml > [ 98%] Generating ../doc/mia-3dmaskseeded.xml > [ 98%] Built target mia-3disosurface-from-volume-xml > [ 98%] Built target mia-3drigidreg-xml > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src && /usr/bin/python > /<<PKGBUILDDIR>>/doc/miaxml2man.py > /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/doc/mia-3drigidreg.xml > >/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src/mia-3drigidreg.1 > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src && > MIA_PLUGIN_TESTPATH=/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugintest//usr/lib/x86_64-linux-gnu/mia-2.4/plugins > ./mia-3dmaskseeded --help-xml > /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/doc/mia-3dmaskseeded.xml > [ 98%] Built target mia-3dgetsize-xml > [ 98%] Generating ../doc/mia-3dmaskseeded.xml > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src && > MIA_PLUGIN_TESTPATH=/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/plugintest//usr/lib/x86_64-linux-gnu/mia-2.4/plugins > ./mia-3dmaskseeded --help-xml > /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/doc/mia-3dmaskseeded.xml > [ 98%] Linking CXX executable test-splineparzenmi > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/mia/core && /usr/bin/cmake -E > cmake_link_script CMakeFiles/test-splineparzenmi.dir/link.txt --verbose=1 > [ 98%] Generating mia-3dmaskseeded.1 > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src && /usr/bin/python > /<<PKGBUILDDIR>>/doc/miaxml2man.py > /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/doc/mia-3dmaskseeded.xml > >/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/src/mia-3dmaskseeded.1 > /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. > -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time > -D_FORTIFY_SOURCE=2 -std=c++11 -fvisibility=hidden -Wl,-z,relro > -Wl,-z,now -Wl,--as-needed -fvisibility=hidden > CMakeFiles/test-splineparzenmi.dir/test_splineparzenmi.cc.o -o > test-splineparzenmi -rdynamic libmiacore-2.4.so.2.0.1 > -lboost_unit_test_framework -lgsl -lgslcblas -lm -lboost_filesystem > -lboost_system -lpthread -ldl -lfftw3f -lxml++-2.6 -lxml2 -lglibmm-2.4 > -lgobject-2.0 -lglib-2.0 -lsigc-2.0 -litpp > -Wl,-rpath,/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/mia/core > make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > [ 98%] Built target mia-3drigidreg-man > make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > Traceback (most recent call last): > File "/<<PKGBUILDDIR>>/doc/miaxml2man.py", line 149, in <module> > X=parse_file(sys.argv[1]) > File "/<<PKGBUILDDIR>>/doc/miareadxml.py", line 781, in parse_file > root = etree.XML(stringstree) > File "src/lxml/lxml.etree.pyx", line 3192, in lxml.etree.XML > (src/lxml/lxml.etree.c:77490) > File "src/lxml/parser.pxi", line 1830, in lxml.etree._parseMemoryDocument > (src/lxml/lxml.etree.c:116674) > File "src/lxml/parser.pxi", line 1718, in lxml.etree._parseDoc > (src/lxml/lxml.etree.c:115324) > File "src/lxml/parser.pxi", line 1090, in lxml.etree._BaseParser._parseDoc > (src/lxml/lxml.etree.c:109723) > File "src/lxml/parser.pxi", line 584, in > lxml.etree._ParserContext._handleParseResultDoc (src/lxml/lxml.etree.c:103584) > File "src/lxml/parser.pxi", line 694, in lxml.etree._handleParseResult > (src/lxml/lxml.etree.c:105238) > File "src/lxml/parser.pxi", line 635, in lxml.etree._raiseParseError > (src/lxml/lxml.etree.c:104381) > lxml.etree.XMLSyntaxError: None > [ 98%] Built target mia-2dsegment-local-cmeans-man > src/CMakeFiles/mia-3dmaskseeded-man.dir/build.make:63: recipe for target > 'src/mia-3dmaskseeded.1' failed > make[4]: *** [src/mia-3dmaskseeded.1] Error 1 The full build log is available from: http://aws-logs.debian.net/2016/11/11/mia_2.4.3-2_unstable.log This failure happens on a CPU with TSX extensions available, but is not reproducible on a machine without them. For context, I recommend reading the thread starting at https://lists.debian.org/debian-devel/2016/11/msg00210.html The node used is an Amazon EC2 VM with 64 cores. /proc/cpuinfo says: model : 79 model name : Intel(R) Xeon(R) CPU E5-2686 v4 @ 2.30GHz stepping : 1 A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
