Package: elastix Version: 4.8-5 Severity: normal User: debian-...@lists.debian.org Usertags: ftbfs-gcc-6
This package fails to build with GCC 6. GCC 6 has not been released yet, but will probably come out this week. You can find GCC 6 in unstable (gcc-6). To build with GCC 6, you can set CC=gcc-6 CXX=g++-6 explicitly. You may be able to find out more about this issue at https://gcc.gnu.org/gcc-6/changes.html > sbuild (Debian sbuild) 0.68.0 (15 Jan 2016) on dl580gen9-02.hlinux ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > [ 26%] Building CXX object > Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxReducedDimensionBSplineResampleInterpolator.cxx.o > cd > /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator > && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -I/usr/include/ITK-4.9 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Comm > on/CostFunctions -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -g -O2 -fstack-protector-strong > -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time > -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -o > CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxReducedDimensionBSplineResampleInterpolator.cxx.o > -c > /<<PKGBUILDDIR>>/src/Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/elxReducedDimensionBSplineResampleInterpolator.cxx > In file included from /usr/include/ITK-4.9/itkLightObject.h:21:0, > from /usr/include/ITK-4.9/itkObject.h:31, > from > /<<PKGBUILDDIR>>/src/Core/Install/elxComponentDatabase.h:22, > from /<<PKGBUILDDIR>>/src/Core/Kernel/elxElastixBase.h:32, > from > /<<PKGBUILDDIR>>/src/Core/Kernel/elxElastixTemplate.h:21, > from /<<PKGBUILDDIR>>/src/Core/Install/elxIncludes.h:39, > from > /<<PKGBUILDDIR>>/src/Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/elxReducedDimensionBSplineResampleInterpolator.h:21, > from > /<<PKGBUILDDIR>>/src/Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/elxReducedDimensionBSplineResampleInterpolator.cxx:19: > /<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses/elxResampleInterpolatorBase.h: > In instantiation of 'class > elastix::ResampleInterpolatorBase<elastix::ElastixTemplate<itk::Image<float, > 2u>, itk::Image<float, 2u> > >': > /<<PKGBUILDDIR>>/src/Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/elxReducedDimensionBSplineResampleInterpolator.h:54:7: > required from 'class > elastix::ReducedDimensionBSplineResampleInterpolator<elastix::ElastixTemplate<itk::Image<float, > 2u>, itk::Image<float, 2u> > >' > /<<PKGBUILDDIR>>/src/Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/elxReducedDimensionBSplineResampleInterpolator.cxx:21:1: > required from 'static int > ReducedDimensionBSplineResampleInterpolator_install<VIndex>::DO(elastix::ComponentDatabase*) > [with unsigned int VIndex = 1u]' > /<<PKGBUILDDIR>>/src/Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/elxReducedDimensionBSplineResampleInterpolator.cxx:21:1: > required from here > /usr/include/ITK-4.9/itkMacro.h:300:23: error: 'const char* > elastix::ResampleInterpolatorBase<TElastix>::GetNameOfClass() const [with > TElastix = elastix::ElastixTemplate<itk::Image<float, 2u>, itk::Image<float, > 2u> >]' marked 'override', but does not override > virtual const char *GetNameOfClass() const ITK_OVERRIDE \ > ^ > /<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses/elxResampleInterpolatorBase.h:51:3: > note: in expansion of macro 'itkTypeMacro' > itkTypeMacro( ResampleInterpolatorBase, BaseComponentSE ); > ^ > Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/build.make:65: > recipe for target > 'Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxReducedDimensionBSplineResampleInterpolator.cxx.o' > failed > make[3]: *** > [Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxReducedDimensionBSplineResampleInterpolator.cxx.o] > Error 1 > make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > CMakeFiles/Makefile2:704: recipe for target > 'Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/all' > failed > make[2]: *** > [Components/ResampleInterpolators/ReducedDimensionBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/all] > Error 2 > make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > Makefile:130: recipe for target 'all' failed -- Martin Michlmayr Linux for HPE Helion, Hewlett Packard Enterprise
