Hi Ben, I received a patch that enables building bowtie on arm64 architecture. Feel free to include the patch available here
https://anonscm.debian.org/viewvc/debian-med/trunk/packages/bowtie/trunk/debian/patches/enable_arm64.patch?view=markup in your next upstream version. I also fixed a spelling issue https://anonscm.debian.org/viewvc/debian-med/trunk/packages/bowtie/trunk/debian/patches/spelling.patch?view=markup and you might like to inspect the other patches applied to the Debian packaging which are all available in SVN https://anonscm.debian.org/viewvc/debian-med/trunk/packages/bowtie/trunk/debian/patches/ which are in most cases regarding the Debian packaged higher version of seqan. Kind regards Andreas. On Wed, Sep 30, 2015 at 07:09:04PM +0100, Edmund Grimley Evans wrote: > Source: bowtie > Version: 1.1.2-1 > Tags: patch > > It seems to build on arm64 with just a tiny change on top of > ppc64el.patch: > > --- bowtie-1.1.2.orig/Makefile > +++ bowtie-1.1.2/Makefile > @@ -125,7 +125,7 @@ > VERSION = $(shell cat VERSION) > > BITS=32 > -ifneq (,$(filter $(shell uname -m), ppc64le x86_64)) > +ifneq (,$(filter $(shell uname -m), aarch64 ppc64le x86_64)) > BITS=64 > endif > # msys will always be 32 bit so look at the cpu arch instead. > --- bowtie-1.1.2.orig/debian/control > +++ bowtie-1.1.2/debian/control > @@ -16,7 +16,7 @@ > Homepage: http://bowtie-bio.sourceforge.net/ > > Package: bowtie > -Architecture: amd64 kfreebsd-amd64 ppc64el > +Architecture: amd64 kfreebsd-amd64 arm64 ppc64el > Depends: ${shlibs:Depends}, > ${misc:Depends}, > python > > _______________________________________________ > Debian-med-packaging mailing list > debian-med-packag...@lists.alioth.debian.org > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging > -- http://fam-tille.de
