Downgrading to 2012 version of ntfs-3g fixed it.

Using ntfs-3g version 2012.1.15AR.5 (or any version earlier
than 2012.1.1AR.7) on a system dual-booting with Windows 8
is very dangerous, as this version is not protected against
fast booting into Windows 8.

Did you disable the fast boot feature of Windows 8, as
explained in http://www.tuxera.com/community/ntfs-3g-advanced/#Downloads ?

Oddly enough, ls will display the folders I had there, but
wouldn't read permissions or list the files inside them.

What are your mount options ? Did you use the permissions option
or define user mapping ?

1. answer questions above
2. install a supported version of nts-3g
3. make sure fast boot into Windows is disabled
4. start a chkdsk on Windows.
5. retry accessing files from Linux
6. if this still fails, post the output of :

sudo ntfsinfo -fm /dev/sdxx
(sdxx being the partition which fails to be read from)


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