Package: r-bioc-genomeinfodb
Version: 1.0.2
Severity: normal
Tags: patch
User: autopkgtest-de...@lists.alioth.debian.org
Usertags: autopkgtest
Dear Maintainer,
The tests are failing in debci using autopkgtest. Below the
autopkgtest's log:
adt-run [01:10:39]: test run-unit-test: [-----------------------
R version 3.1.1 (2014-07-10) -- "Sock it to Me"
Copyright (C) 2014 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
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Type 'license()' or 'licence()' for distribution details.
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Type 'contributors()' for more information and
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Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> BiocGenerics:::testPackage("GenomeInfoDb")
Error in loadNamespace(name) : there is no package called 'BiocGenerics'
Calls: ::: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
adt-run [01:10:39]: test run-unit-test: -----------------------]
This occurred because it have some missing dependencies. I added the
package's dependencies, r-bioc-biocgenerics and r-cran-runit, with this
changes all the tests are passing.
Thanks for consider it!
-- System Information:
Debian Release: jessie/sid
APT prefers unstable
APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)
Kernel: Linux 3.14-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
diff -Nru r-bioc-genomeinfodb-1.0.2.orig/debian/tests/control r-bioc-genomeinfodb-1.0.2/debian/tests/control
--- r-bioc-genomeinfodb-1.0.2.orig/debian/tests/control 2014-08-27 01:04:57.109000926 -0300
+++ r-bioc-genomeinfodb-1.0.2/debian/tests/control 2014-08-27 01:08:44.896722324 -0300
@@ -1 +1,2 @@
Tests: run-unit-test
+Depends: @, r-bioc-biocgenerics, r-cran-runit
