Hi Andreas,
Andreas Tille <andr...@an3as.eu> schrieb : > Hi Ivo, > > ping? Any idea how we could proceed here? I were absent for a while, sorry for the long delay... But - it seems, that the xz compression was not properly handled in the clean target. Works for me, I added some changes because of the changed behavior of uscan. There is a new version out, but this I couldn't get to build yet. Best, Ivo > On Mon, May 05, 2014 at 03:14:10PM +0200, Andreas Tille wrote: > > Hi Ivo, > > > > please always either keep the bug report we are working on or at > > least the maintainers list in CC to keep others informed that we > > are working on the issue. > > > > On Mon, May 05, 2014 at 01:07:26PM +0200, Ivo Maintz wrote: > > > Hi Andreas, > > > > > > Andreas Tille <ti...@debian.org> schrieb : > > > > > > > > > However, I just realised that version 5.10.0 is out and > > > > > > this does not contain prettify.js any more. Would you be > > > > > > able to adapt the patches and we try again with this > > > > > > version? > > > > > > > > > > Is done; one issue: get-orig-source don't exclude > > > > > docs/src/prettify (it is still included in the main source), > > > > > but it is still listed in debian/copyright. > > > > > > > > This is what I thought in the first place. However, lintian > > > > seems to try to tell us something else. The file is not even > > > > in upstream tarball any more but I have no idea what lintian > > > > tries to express. If I were you I would ask for help on > > > > debian-mentors@l.d.o for help since I have no good idea what to > > > > do. > > > > > > > > > It works now. Simple solution: the path to prettify had changed... > > > Would you double-check it? > > > > Sorry, I can't help myself but I do not manage to build. I have > > commited some slight change that should deal with xz compressed > > tarballs which would be pretty useful in this case. However, even > > if I work with a *.gz tarball the package does not build and > > stumbles after the clean target. I have attached a build log and > > the diff that dpkg-source has found. I keep on beeing sceptical > > about this strange way to build the package - at least for me it > > only works not reliable. :-( > > > > Kind regards > > > > Andreas. > > > > -- > > http://fam-tille.de > > > dpkg-checkbuilddeps: Unmet build dependencies: swig (>= 2) > > libperl-dev octave-pkg-dev mono-devel mono-gmcs cli-common-dev > > cli-runtime W: Unmet build-dependency in source dpkg-buildpackage: > > source package libsbml dpkg-buildpackage: source version > > 5.10.0+dfsg-1 dpkg-buildpackage: source distribution unstable > > dpkg-buildpackage: source changed by Andreas Tille > > <ti...@debian.org> dpkg-source -i.git -I.git --before-build > > libSBML-5.10.0-Source dpkg-checkbuilddeps: Unmet build > > dependencies: swig (>= 2) libperl-dev octave-pkg-dev mono-devel > > mono-gmcs cli-common-dev cli-runtime dpkg-buildpackage: warning: > > build dependencies/conflicts unsatisfied; aborting > > dpkg-buildpackage: warning: (Use -d flag to override.) > > dpkg-buildpackage: warning: this is currently a non-fatal warning > > with -S, but will probably become fatal in the future fakeroot > > debian/rules clean dh clean --with-python2 > > --dbg-package=libsbml5-dbg dh_testdir -O--with-python2 > > -O--dbg-package=libsbml5-dbg debian/rules override_dh_auto_clean > > make[1]: Entering directory > > `/home/andreas/debian-maintain/repack/libsmbl5/libSBML-5.10.0-Source' > > ### the clean target of the libsbml makefile is highly b0rken ### > > ### the switch to cmake didn't result in great approvements ### ### > > still inline changes of files ### ### very ugly ### rm -rf .debs > > config docs examples macosx src config.guess config.sub build find > > -maxdepth 1 -type f -delete dh_clean if > > [ -e ../libsbml_5.10.0+dfsg.orig.tar.xz ] ; then COMP=xz ; else > > COMP=gz ; fi ; \ tar --no-same-owner > > -xaf ../libsbml_5.10.0+dfsg.orig.tar.${COMP} --strip-components=1 > > make[1]: Leaving directory > > `/home/andreas/debian-maintain/repack/libsmbl5/libSBML-5.10.0-Source' > > dh_clean -O--with-python2 -O--dbg-package=libsbml5-dbg dpkg-source > > -i.git -I.git -b libSBML-5.10.0-Source dpkg-source: info: using > > source format `3.0 (quilt)' dpkg-source: info: building libsbml > > using existing ./libsbml_5.10.0+dfsg.orig.tar.gz dpkg-source: info: > > local changes detected, the modified files are: > > libSBML-5.10.0-Source/OLD_NEWS.txt > > libSBML-5.10.0-Source/config/makefile-common-actions.mk > > libSBML-5.10.0-Source/docs/CMakeLists.txt > > libSBML-5.10.0-Source/docs/src/libsbml-accessing.html > > libSBML-5.10.0-Source/src/bindings/csharp/csdoc.i > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files-win/Reaction.cs > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files-win/SBMLError.cs > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files-win/SBMLReader.cs > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files-win/SBase.cs > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files/Reaction.cs > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files/SBMLError.cs > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files/SBMLReader.cs > > libSBML-5.10.0-Source/src/bindings/csharp/csharp-files/SBase.cs > > libSBML-5.10.0-Source/src/bindings/java/java-files/org/sbml/libsbml/Reaction.java > > libSBML-5.10.0-Source/src/bindings/java/java-files/org/sbml/libsbml/SBMLError.java > > libSBML-5.10.0-Source/src/bindings/java/java-files/org/sbml/libsbml/SBMLReader.java > > libSBML-5.10.0-Source/src/bindings/java/java-files/org/sbml/libsbml/SBase.java > > libSBML-5.10.0-Source/src/bindings/java/javadoc.i > > libSBML-5.10.0-Source/src/bindings/matlab/FindMatlab.cmake > > libSBML-5.10.0-Source/src/bindings/matlab/Makefile.in > > libSBML-5.10.0-Source/src/bindings/matlab/mexopts-R2009-R2010.sh > > libSBML-5.10.0-Source/src/bindings/perl/LibSBML.pm > > libSBML-5.10.0-Source/src/bindings/perl/LibSBML.pod > > libSBML-5.10.0-Source/src/bindings/perl/Makefile.in > > libSBML-5.10.0-Source/src/bindings/python/libsbml-doxygen.py > > libSBML-5.10.0-Source/src/bindings/python/libsbml.py > > libSBML-5.10.0-Source/src/bindings/python/libsbml_wrap.cpp > > libSBML-5.10.0-Source/src/bindings/python/local.i > > libSBML-5.10.0-Source/src/bindings/python/pydoc-doxygen.i > > libSBML-5.10.0-Source/src/bindings/python/pydoc-normal.i > > libSBML-5.10.0-Source/src/sbml/Reaction.h > > libSBML-5.10.0-Source/src/sbml/SBMLReader.cpp > > libSBML-5.10.0-Source/src/sbml/SBMLReader.h > > libSBML-5.10.0-Source/src/sbml/SBase.h > > libSBML-5.10.0-Source/src/sbml/common/common-documentation.h > > libSBML-5.10.0-Source/src/sbml/packages/comp/validator/CompSBMLError.h > > libSBML-5.10.0-Source/src/sbml/packages/comp/validator/CompSBMLErrorTable.h > > dpkg-source: error: aborting due to unexpected upstream changes, > > see /tmp/libsbml_5.10.0+dfsg-1.diff.KtELfa dpkg-source: info: you > > can integrate the local changes with dpkg-source --commit > > dpkg-buildpackage: error: dpkg-source -i.git -I.git -b > > libSBML-5.10.0-Source gave error exit status 2 > > > > _______________________________________________ > > Debian-med-packaging mailing list > > debian-med-packag...@lists.alioth.debian.org > > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging > > -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". 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