Source: r-bioc-genomicfeatures Version: 1.14.2-1 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20140718 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > fakeroot debian/rules binary > test -x debian/rules > dh_testroot > dh_prep > dh_installdirs -A > mkdir -p "." > dh_installdirs usr/lib/R/site-library > echo "R:Depends=r-base-core (>= 3.1.1-1)" >> > debian/r-bioc-genomicfeatures.substvars > if test -f /usr/bin/xvfb-run; then \ > xvfb-run -a \ > R CMD INSTALL -l > /«PKGBUILDDIR»/debian/r-bioc-genomicfeatures/usr/lib/R/site-library --clean > \ > . ; \ > else \ > R CMD INSTALL -l > /«PKGBUILDDIR»/debian/r-bioc-genomicfeatures/usr/lib/R/site-library \ > --clean . ;\ > fi > * installing *source* package 'GenomicFeatures' ... > ** R > ** inst > ** preparing package for lazy loading > code for methods in class "TranscriptDb" was not checked for suspicious field > assignments (recommended package 'codetools' not available?) > ** help > *** installing help indices > ** building package indices > ** testing if installed package can be loaded > Warning: no function found corresponding to methods exports from > 'GenomicFeatures' for: 'findSpliceOverlaps' > Error in loadNamespace(package, c(which.lib.loc, lib.loc)) : > in 'GenomicFeatures' methods for export not found: findSpliceOverlaps > Error: loading failed > Execution halted > ERROR: loading failed > * removing > '/«PKGBUILDDIR»/debian/r-bioc-genomicfeatures/usr/lib/R/site-library/GenomicFeatures' > make: *** [R_any_arch] Error 1 The full build log is available from: http://aws-logs.debian.net/ftbfs-logs/2014/07/18/r-bioc-genomicfeatures_1.14.2-1_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures. -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
