Package: r-bioc-iranges Version: 1.20.6-1 Tags: patch User: ubuntu-de...@lists.ubuntu.com Usertags: origin-ubuntu ubuntu-patch trusty
Hello,
r-bioc-iranges's autopkgtest currently fails [1]:
Error in BiocGenerics:::testPackage("IRanges") : RUnit package not found
After adding it (r-cran-runit), it fails because the test produces a
lot of stderror. Attached debdiff fixes these two, but now the test
encounters some actual failures:
Error in .CompressedIRangesList.range(x) :
the XVector package is required by the "range" method for
CompressedIRangesList objects
(it repeats that a few times).
Attached debdiff fixes all these issues, the autopkgtest succeeds now.
Thanks for considering,
Martin
[1]
https://jenkins.qa.ubuntu.com/job/trusty-adt-r-bioc-iranges/8/ARCH=i386,label=adt/console
--
Martin Pitt | http://www.piware.de
Ubuntu Developer (www.ubuntu.com) | Debian Developer (www.debian.org)
diff -Nru r-bioc-iranges-1.20.6/debian/changelog r-bioc-iranges-1.20.6/debian/changelog --- r-bioc-iranges-1.20.6/debian/changelog 2013-12-03 11:42:42.000000000 +0100 +++ r-bioc-iranges-1.20.6/debian/changelog 2014-01-16 12:21:24.000000000 +0100 @@ -1,3 +1,10 @@ +r-bioc-iranges (1.20.6-1ubuntu1) trusty; urgency=medium + + * debian/tests/control: Add missing r-cran-runit and r-bioc-xvector test + dependencies, and allow stderr output. + + -- Martin Pitt <martin.p...@ubuntu.com> Thu, 16 Jan 2014 12:11:17 +0100 + r-bioc-iranges (1.20.6-1) unstable; urgency=low * New upstream version diff -Nru r-bioc-iranges-1.20.6/debian/tests/control r-bioc-iranges-1.20.6/debian/tests/control --- r-bioc-iranges-1.20.6/debian/tests/control 2013-11-05 09:42:06.000000000 +0100 +++ r-bioc-iranges-1.20.6/debian/tests/control 2014-01-16 12:16:28.000000000 +0100 @@ -1 +1,3 @@ Tests: run-unit-test +Depends: @, r-cran-runit, r-bioc-xvector +Restrictions: allow-stderr
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