Package: wnpp Severity: wishlist Owner: Charles Plessy <ple...@debian.org>
Hello everybody, I intend to package the HTSlib, that some existing packages (samtools, tabix) will need later. Cheers, -- Charles Plessy, Tsurumi, Kanagawa, Japan Package name : htslib Version : 0.2 Upstream Author : See below URL : https://github.com/samtools/htslib/tree/develop License : Mostly MIT, see below Programming Lang: C Description : C library for high-throughput sequencing data formats Package: libhts0 Architecture: any Multi-Arch: same Depends: ${shlibs:Depends}, ${misc:Depends} Description: C library for high-throughput sequencing data formats HTSlib is a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map) and VCF (Variant Call Format), used for nucleic acid sequence data obtained by high-throughput sequencing. . HTSlib implements a generalized BAM (binary SAM) index. The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . HTSlib is still experimental. It has not been tested on large-scale real data. Some useful APIs are missing. Package: libhts-dev Architecture: any Multi-Arch: same Section: libdevel Depends: ${shlibs:Depends}, ${misc:Depends} Description: Development files for the HTSlib HTSlib is a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map) and VCF (Variant Call Format), used for nucleic acid sequence data obtained by high-throughput sequencing. . This package contains development files: headers, static library, manual pages, etc. Package: htslib-test Architecture: all Depends: ${misc:Depends} Description: Test data for HTSlib HTSlib is a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map) and VCF (Variant Call Format), used for nucleic acid sequence data obtained by high-throughput sequencing. . This package contains test files and scripts for the HTSlib. Files: * Copyright: (C) 2012-2013 Genome Research Ltd. (c) 2008 Broad Institute / Massachusetts Institute of Technology The Wellcome Trust Sanger Institute (c) 2008, 2009, 2011 by Attractive Chaos <attrac...@live.co.uk> License: MIT Files: cram/* Copyright: (c) 2012-2013 Genome Research Ltd. (c) 1995-1996 MEDICAL RESEARCH COUNCIL License: Various_BSD-3-Clause Files: cram/md5.? Copyright: No copyright is claimed License: solar-MD5 This is an OpenSSL-compatible implementation of the RSA Data Security, Inc. MD5 Message-Digest Algorithm (RFC 1321). . Homepage: http://openwall.info/wiki/people/solar/software/public-domain-source-code/md5 . Author: Alexander Peslyak, better known as Solar Designer <solar at openwall.com> . This software was written by Alexander Peslyak in 2001. No copyright is claimed, and the software is hereby placed in the public domain. In case this attempt to disclaim copyright and place the software in the public domain is deemed null and void, then the software is Copyright (c) 2001 Alexander Peslyak and it is hereby released to the general public under the following terms: . Redistribution and use in source and binary forms, with or without modification, are permitted. . There's ABSOLUTELY NO WARRANTY, express or implied. Files: htslib/razf.? Copyright: 2008, Jue Ruan <ruan...@gmail.com>, Heng Li <l...@sanger.ac.uk> License: BSD-2-clause~with-minor-differences-in-the-disclaimer -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
