Package: nifti2dicom Version: 0.4.6-2 Severity: important $> nib-ls phantom_3_1.nii.gz phantom_3_1.nii.gz int16 [ 64, 64, 40, 121] 3.75x3.75x3.50x2.50 *1.24+0 sform
# so the file is there $> gdb --args /usr/bin/nifti2dicom --accessionnumber 3 -i phantom_3_1.nii.gz -o DICOM.generated GNU gdb (GDB) 7.6 (Debian 7.6-5) Copyright (C) 2013 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html> This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Type "show copying" and "show warranty" for details. This GDB was configured as "x86_64-linux-gnu". For bug reporting instructions, please see: <http://www.gnu.org/software/gdb/bugs/>... Reading symbols from /usr/bin/nifti2dicom...(no debugging symbols found)...done. (gdb) r Starting program: /usr/bin/nifti2dicom --accessionnumber 3 -i phantom_3_1.nii.gz -o DICOM.generated warning: Could not load shared library symbols for linux-vdso.so.1. Do you need "set solib-search-path" or "set sysroot"? [Thread debugging using libthread_db enabled] Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1". * Reading input image... Program received signal SIGSEGV, Segmentation fault. 0x00007ffff5d4aa9a in itk::NiftiImageIO::Read(void*) () from /usr/lib/libITKIONIFTI-4.4.so.1 (gdb) bt #0 0x00007ffff5d4aa9a in itk::NiftiImageIO::Read(void*) () from /usr/lib/libITKIONIFTI-4.4.so.1 #1 0x00000000004f7fe2 in itk::ImageFileReader<itk::Image<float, 3u>, itk::DefaultConvertPixelTraits<float> >::GenerateData() () #2 0x00007ffff715a327 in itk::ProcessObject::UpdateOutputData(itk::DataObject*) () from /usr/lib/libITKCommon-4.4.so.1 #3 0x00000000004f4ab8 in bool n2d::InputImporter::InternalRead<float>() () #4 0x00000000004aa748 in n2d::InputImporter::Import() () #5 0x00000000004830ce in main () (gdb) the file in question could be obtained from http://www.onerussian.com/tmp/phantom_3_1.nii.gz -- System Information: Debian Release: jessie/sid APT prefers testing APT policy: (900, 'testing'), (600, 'unstable'), (300, 'experimental') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 3.9-1-amd64 (SMP w/2 CPU cores) Locale: LANG=en_US, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/bash Versions of packages nifti2dicom depends on: ii libc6 2.17-93 ii libgcc1 1:4.8.1-10 ii libinsighttoolkit4.4 4.4.2-4 ii libstdc++6 4.8.1-10 ii nifti2dicom-data 0.4.6-2 nifti2dicom recommends no packages. nifti2dicom suggests no packages. -- no debconf information -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
