Source: cmtk Version: 2.2.2-2 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20130620 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part: > make[1]: Entering directory `/«PKGBUILDDIR»' > dh_auto_configure -- \ > -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ > -DBUILD_APPS:BOOL=ON \ > -DBUILD_DOCUMENTATION:BOOL=OFF \ > -DBUILD_GUI:BOOL=ON \ > -DBUILD_SHARED_LIBS:BOOL=ON \ > -DBUILD_TESTING:BOOL=OFF \ > -DCMTK_BUILD_DCMTK:BOOL=OFF \ > -DCMTK_BUILD_MXML:BOOL=OFF \ > -DCMTK_BUILD_NRRD:BOOL=ON \ > -DCMTK_BUILD_SQLITE:BOOL=OFF \ > -DCMTK_BUILD_ZLIB:BOOL=OFF \ > -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ > -DCMTK_USE_DCMTK:BOOL=ON \ > -DCMTK_USE_FFTW:BOOL=ON \ > -DCMTK_USE_QT:BOOL=ON \ > -DCMTK_USE_SMP:BOOL=ON \ > -DCMTK_USE_SQLITE:BOOL=ON \ > -DDART_TESTING_TIMEOUT:STRING=15000 \ > -DMXML_INCLUDE_DIR:PATH=/usr/include \ > -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ > -DCMAKE_SKIP_RPATH:BOOL=OFF \ > -DCMTK_BUILD_WRAPPER:BOOL=ON \ > > mkdir -p obj-x86_64-linux-gnu > cd obj-x86_64-linux-gnu > cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON > -DCMAKE_BUILD_TYPE=RelWithDebInfo -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON > -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=ON > -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF > -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF > -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF > -DCMTK_BUILD_ZLIB:BOOL=OFF > -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas > -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=ON > -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON > -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include > -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF > -DCMTK_BUILD_WRAPPER:BOOL=ON > -- The C compiler identification is GNU 4.8.1 > -- The CXX compiler identification is GNU 4.8.1 > -- Check for working C compiler: /usr/bin/cc > -- Check for working C compiler: /usr/bin/cc -- works > -- Detecting C compiler ABI info > -- Detecting C compiler ABI info - done > -- Check for working CXX compiler: /usr/bin/c++ > -- Check for working CXX compiler: /usr/bin/c++ -- works > -- Detecting CXX compiler ABI info > -- Detecting CXX compiler ABI info - done > CMake Error at CMakeLists.txt:53 (INCLUDE): > include could not find load file: > > /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles/CMakeSystem.cmake > > > -- Looking for sys/types.h > -- Looking for sys/types.h - found > -- Looking for stdint.h > -- Looking for stdint.h - found > -- Looking for stddef.h > -- Looking for stddef.h - found > -- Check size of int > -- Check size of int - done > -- Check size of long > -- Check size of long - done > -- Check size of void* > -- Check size of void* - done > -- Check size of char > -- Check size of char - done > -- Check size of short > -- Check size of short - done > -- Check size of float > -- Check size of float - done > -- Check size of double > -- Check size of double - done > -- Looking for limits.h > -- Looking for limits.h - found > -- Looking for unistd.h > -- Looking for unistd.h - found > -- Looking for pthread.h > -- Looking for pthread.h - found > -- Looking for include files sys/types.h, sys/prctl.h > -- Looking for include files sys/types.h, sys/prctl.h - found > -- Check if the system is big endian > -- Searching 16 bit integer > -- Check size of unsigned short > -- Check size of unsigned short - done > -- Using unsigned short > -- Check if the system is big endian - little endian > -- Looking for pthread_create > -- Looking for pthread_create - not found > -- Looking for pthread_create in pthreads > -- Looking for pthread_create in pthreads - not found > -- Looking for pthread_create in pthread > -- Looking for pthread_create in pthread - found > -- Found Threads: TRUE > -- Looking for C++ include iostream > -- Looking for C++ include iostream - found > -- Check for STD namespace > -- Check for STD namespace - found > -- Check for ANSI scope > -- Check for ANSI scope - found > -- Check for sstream > -- Check for sstream - found > -- System is Linux-2.6.32-5-xen-amd64 > -- Looking for include file dirent.h > -- Looking for include file dirent.h - found > -- Looking for include file execinfo.h > -- Looking for include file execinfo.h - found > -- Looking for include file fcntl.h > -- Looking for include file fcntl.h - found > -- Looking for include file ieeefp.h > -- Looking for include file ieeefp.h - not found > -- Looking for include file inttypes.h > -- Looking for include file inttypes.h - found > -- Looking for include file malloc.h > -- Looking for include file malloc.h - found > -- Looking for include file pthread.h > -- Looking for include file pthread.h - found > -- Looking for include file termios.h > -- Looking for include file termios.h - found > -- Looking for include file unistd.h > -- Looking for include file unistd.h - found > -- Looking for include file values.h > -- Looking for include file values.h - found > -- Looking for include file sys/ioctl.h > -- Looking for include file sys/ioctl.h - found > -- Looking for include file sys/procfs.h > -- Looking for include file sys/procfs.h - found > -- Looking for include file sys/stat.h > -- Looking for include file sys/stat.h - found > -- Looking for include file sys/time.h > -- Looking for include file sys/time.h - found > -- Looking for include file sys/times.h > -- Looking for include file sys/times.h - found > -- Looking for include file sys/utsname.h > -- Looking for include file sys/utsname.h - found > -- Check if the system is big endian > -- Searching 16 bit integer > -- Using unsigned short > -- Check if the system is big endian - little endian > -- Check the value of the 22nd bit of a 32-bit quiet-NaN > -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 > -- Looking for C++ include unordered_map > -- Looking for C++ include unordered_map - not found > -- Looking for C++ include hash_map > -- Looking for C++ include hash_map - found > -- Try OpenMP C flag = [-fopenmp] > -- Performing Test OpenMP_FLAG_DETECTED > -- Performing Test OpenMP_FLAG_DETECTED - Success > -- Try OpenMP CXX flag = [-fopenmp] > -- Performing Test OpenMP_FLAG_DETECTED > -- Performing Test OpenMP_FLAG_DETECTED - Success > -- Found OpenMP: -fopenmp > -- Looking for include file dispatch/dispatch.h > -- Looking for include file dispatch/dispatch.h - not found > -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE > -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success > -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) > -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8") > -- Using system zlib > -- Using system mxml > -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6") > -- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so > -- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so - > found > -- Found system libbz2 > -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) > -- Found DCMTK: /usr/include/dcmtk/config > -- - tested library png > -- - tested library tiff > -- - tested library CharLS > -- Using system DCMTK library. > -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) > -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so > -- Using system sqlite3 library > -- Looking for Q_WS_X11 > -- Looking for Q_WS_X11 - found > -- Looking for Q_WS_WIN > -- Looking for Q_WS_WIN - not found > -- Looking for Q_WS_QWS > -- Looking for Q_WS_QWS - not found > -- Looking for Q_WS_MAC > -- Looking for Q_WS_MAC - not found > -- Found Qt4: /usr/bin/qmake (found suitable version "4.8.4", minimum > required is "4.3.0") > Qt4 Found OK () > -- Configuring incomplete, errors occurred! > dh_auto_configure: cmake .. -DCMAKE_INSTALL_PREFIX=/usr > -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=RelWithDebInfo > -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON > -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=ON > -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF > -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF > -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF > -DCMTK_BUILD_ZLIB:BOOL=OFF > -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas > -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=ON > -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON > -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include > -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF > -DCMTK_BUILD_WRAPPER:BOOL=ON returned exit code 1 > make[1]: *** [override_dh_auto_configure] Error 2 The full build log is available from: http://aws-logs.debian.net/ftbfs-logs/2013/06/20/cmtk_2.2.2-2_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures. -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
