Your message dated Wed, 03 Dec 2025 16:04:44 +0000
with message-id <[email protected]>
and subject line Bug#1114370: fixed in seq-gen 1.3.5-1
has caused the Debian Bug report #1114370,
regarding seq-gen: FTBFS: seq-gen.c:143:6: error: conflicting types for
'ReadParams'; have 'void(int, char **)'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1114370: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1114370
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:seq-gen
Version: 1.3.4-2
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build.
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202509/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:seq-gen, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --sourcedirectory=source
dh_auto_clean -O--sourcedirectory=source
cd source && make -j2 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>/source'
/bin/rm -f *~ *.o core
make[1]: Leaving directory '/<<PKGBUILDDIR>>/source'
dh_autoreconf_clean -O--sourcedirectory=source
debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
echo -g -O2 -Werror=implicit-function-declaration
-ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-g -O2 -Werror=implicit-function-declaration
-ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
[ ! -f source/seq-gen ] || rm source/seq-gen
dh_clean
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules binary
dh binary --sourcedirectory=source
dh_update_autotools_config -O--sourcedirectory=source
dh_autoreconf -O--sourcedirectory=source
dh_auto_configure -O--sourcedirectory=source
dh_auto_build -O--sourcedirectory=source
cd source && make -j2 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/source'
cc -g -O2 -Werror=implicit-function-declaration
-ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -c seq-gen.c
cc -g -O2 -Werror=implicit-function-declaration
-ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -c global.c
seq-gen.c:143:6: error: conflicting types for âReadParamsâ; have
âvoid(int, char **)â
143 | void ReadParams(int argc, char **argv)
| ^~~~~~~~~~
seq-gen.c:78:13: note: previous declaration of âReadParamsâ with type
âvoid(void)â
78 | static void ReadParams();
| ^~~~~~~~~~
seq-gen.c: In function âOpenTreeFileâ:
seq-gen.c:690:25: warning: ignoring return value of âfgetsâ declared with
attribute âwarn_unused_resultâ [-Wunused-result]
690 | fgets(st, 255, stdin);
| ^~~~~~~~~~~~~~~~~~~~~
seq-gen.c: In function âReadFileParamsâ:
seq-gen.c:584:17: warning: ignoring return value of âfgetsâ declared with
attribute âwarn_unused_resultâ [-Wunused-result]
584 | fgets(st, 255, tree_fv);
| ^~~~~~~~~~~~~~~~~~~~~~~
make[1]: *** [Makefile:13: seq-gen.o] Error 1
make[1]: *** Waiting for unfinished jobs....
make[1]: Leaving directory '/<<PKGBUILDDIR>>/source'
dh_auto_build: error: cd source && make -j2 "INSTALL=install
--strip-program=true" returned exit code 2
make: *** [debian/rules:8: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: seq-gen
Source-Version: 1.3.5-1
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
seq-gen, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated seq-gen package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 03 Dec 2025 16:24:48 +0100
Source: seq-gen
Binary: seq-gen seq-gen-dbgsym
Architecture: source amd64
Version: 1.3.5-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
seq-gen - simulate the evolution of nucleotide or amino acid sequences
Closes: 1114370
Changes:
seq-gen (1.3.5-1) unstable; urgency=medium
.
* New upstream version
Closes: #1114370
* d/watch: version=5
* Standards-Version: 4.7.2 (routine-update)
* Use secure URI in Homepage field.
* Remove obsolete field Name from debian/upstream/metadata
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