Your message dated Mon, 23 Dec 2024 15:34:37 +0000
with message-id <e1tpks5-002bum...@fasolo.debian.org>
and subject line Bug#1046152: fixed in mcl 1:22-282+ds-3
has caused the Debian Bug report #1046152,
regarding mcl: Fails to build source after successful build
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1046152: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1046152
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: mcl
Version: 1:22-282+ds-2
Severity: minor
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: debian...@lists.debian.org
Usertags: qa-doublebuild
Hi,
This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).
This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.
More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild
Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env
> -us -uc -rfakeroot -S
> -----------------------------------------------------------------------------------------------------------------
>
> dpkg-buildpackage: info: source package mcl
> dpkg-buildpackage: info: source version 1:22-282+ds-2
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Nilesh Patra <nil...@debian.org>
> dpkg-source --before-build .
> debian/rules clean
> dh clean
> dh_auto_clean
> make -j8 distclean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> Making distclean in .
> make[2]: Entering directory '/<<PKGBUILDDIR>>'
> test -z "" || rm -f
> rm -f config.h stamp-h1
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f cscope.out cscope.in.out cscope.po.out cscope.files
> make[2]: Leaving directory '/<<PKGBUILDDIR>>'
> Making distclean in img
> make[2]: Entering directory '/<<PKGBUILDDIR>>/img'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/img'
> Making distclean in graphs
> make[2]: Entering directory '/<<PKGBUILDDIR>>/graphs'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/graphs'
> Making distclean in doc
> make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
> Making distclean in src
> make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
> Making distclean in .
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
> Making distclean in clew
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/clew'
> test -z "libclew.a" || rm -f libclew.a
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/cat.Po
> rm -f ./.deps/claw.Po
> rm -f ./.deps/clm.Po
> rm -f ./.deps/scan.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/clew'
> Making distclean in mcl
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/mcl'
> test -z "libmcl.a" || rm -f libmcl.a
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/alg.Po
> rm -f ./.deps/dpsd.Po
> rm -f ./.deps/expand.Po
> rm -f ./.deps/inflate.Po
> rm -f ./.deps/interpret.Po
> rm -f ./.deps/proc.Po
> rm -f ./.deps/procinit.Po
> rm -f ./.deps/transform.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/mcl'
> Making distclean in gryphon
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/gryphon'
> test -z "libgryphon.a" || rm -f libgryphon.a
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/path.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/gryphon'
> Making distclean in impala
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/impala'
> test -z "libimpala.a" || rm -f libimpala.a
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/app.Po
> rm -f ./.deps/compose.Po
> rm -f ./.deps/edge.Po
> rm -f ./.deps/iface.Po
> rm -f ./.deps/io.Po
> rm -f ./.deps/ivp.Po
> rm -f ./.deps/matrix.Po
> rm -f ./.deps/pval.Po
> rm -f ./.deps/stream.Po
> rm -f ./.deps/tab.Po
> rm -f ./.deps/vector.Po
> rm -f ./.deps/version.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/impala'
> Making distclean in shcl
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/shcl'
> test -z "clm" || rm -f clm
> test -z "clmdag clmframe" || rm -f clmdag clmframe
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/clm.Po
> rm -f ./.deps/clmadjust.Po
> rm -f ./.deps/clmclose.Po
> rm -f ./.deps/clmdag.Po
> rm -f ./.deps/clmdist.Po
> rm -f ./.deps/clmframe.Po
> rm -f ./.deps/clmimac.Po
> rm -f ./.deps/clminfo.Po
> rm -f ./.deps/clminfo2.Po
> rm -f ./.deps/clmmate.Po
> rm -f ./.deps/clmmeet.Po
> rm -f ./.deps/clmoptics.Po
> rm -f ./.deps/clmorder.Po
> rm -f ./.deps/clmps.Po
> rm -f ./.deps/clmresidue.Po
> rm -f ./.deps/report.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/shcl'
> Making distclean in shmcl
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/shmcl'
> test -z "mcl" || rm -f mcl
> test -z "mclcm" || rm -f mclcm
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/mcl.Po
> rm -f ./.deps/mclcm.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/shmcl'
> Making distclean in shmx
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/shmx'
> test -z "mcx mcxsubs mcxmap mcxarray mcxdump mcxload" || rm -f mcx mcxsubs
> mcxmap mcxarray mcxdump mcxload
> test -z "mcxtest2 mcxtest mcxminusmeet mcxmm mcxmetric mcxrand mcxassemble"
> || rm -f mcxtest2 mcxtest mcxminusmeet mcxmm mcxmetric mcxrand mcxassemble
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/mcx.Po
> rm -f ./.deps/mcxalter.Po
> rm -f ./.deps/mcxarray.Po
> rm -f ./.deps/mcxassemble.Po
> rm -f ./.deps/mcxclcf.Po
> rm -f ./.deps/mcxcollect.Po
> rm -f ./.deps/mcxconvert.Po
> rm -f ./.deps/mcxdiameter.Po
> rm -f ./.deps/mcxdump.Po
> rm -f ./.deps/mcxerdos.Po
> rm -f ./.deps/mcxfp.Po
> rm -f ./.deps/mcxload.Po
> rm -f ./.deps/mcxmap.Po
> rm -f ./.deps/mcxmetric.Po
> rm -f ./.deps/mcxminusmeet.Po
> rm -f ./.deps/mcxmm.Po
> rm -f ./.deps/mcxquery.Po
> rm -f ./.deps/mcxrand.Po
> rm -f ./.deps/mcxsubs.Po
> rm -f ./.deps/mcxtab.Po
> rm -f ./.deps/mcxtest.Po
> rm -f ./.deps/mcxtest2.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/shmx'
> Making distclean in shmcx
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/shmcx'
> test -z "mcxi" || rm -f mcxi
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/glob.Po
> rm -f ./.deps/mcxi.Po
> rm -f ./.deps/ops.Po
> rm -f ./.deps/stack.Po
> rm -f ./.deps/util.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/shmcx'
> Making distclean in shmcxquery
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src/shmcxquery'
> test -z "mcxquery" || rm -f mcxquery
> rm -f *.o
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/mcxquery.Po
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/shmcxquery'
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
> Making distclean in include
> make[2]: Entering directory '/<<PKGBUILDDIR>>/include'
> Making distclean in .
> make[3]: Entering directory '/<<PKGBUILDDIR>>/include'
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/include'
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/include'
> Making distclean in scripts
> make[2]: Entering directory '/<<PKGBUILDDIR>>/scripts'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/scripts'
> Making distclean in rcl
> make[2]: Entering directory '/<<PKGBUILDDIR>>/rcl'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/rcl'
> Making distclean in testing
> make[2]: Entering directory '/<<PKGBUILDDIR>>/testing'
> Making distclean in .
> make[3]: Entering directory '/<<PKGBUILDDIR>>/testing'
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/testing'
> Making distclean in stream
> make[3]: Entering directory '/<<PKGBUILDDIR>>/testing/stream'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/testing/stream'
> Making distclean in blast
> make[3]: Entering directory '/<<PKGBUILDDIR>>/testing/blast'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/testing/blast'
> Making distclean in setops
> make[3]: Entering directory '/<<PKGBUILDDIR>>/testing/setops'
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/testing/setops'
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/testing'
> Making distclean in shed
> make[2]: Entering directory '/<<PKGBUILDDIR>>/shed'
> Making distclean in .
> make[3]: Entering directory '/<<PKGBUILDDIR>>/shed'
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/shed'
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/shed'
> rm -f config.status config.cache config.log configure.lineno
> config.status.lineno
> rm -f Makefile
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_autoreconf_clean
> debian/rules override_dh_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_clean
> find . -name "*.zmr" -delete
> find . -name "*.zmt" -delete
> rm -rf doc/*.1 doc/*.html doc/*-html doc/*.ps
> rm -rf src/alien/oxygen/doc/*.1 src/alien/oxygen/doc/*.html
> src/alien/oxygen/doc/*.ps
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building mcl using existing ./mcl_22-282+ds.orig.tar.xz
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: warning: ignoring deletion of file aclocal.m4, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file INSTALL, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file configure, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file config.h.in, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file autofoo/install-sh, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file autofoo/compile, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file autofoo/mkinstalldirs, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file autofoo/depcomp, use
> --include-removal to override
> dpkg-source: warning: ignoring deletion of file autofoo/missing, use
> --include-removal to override
> dpkg-source: info: local changes detected, the modified files are:
> mcl-22-282+ds/doc/mcl.txt
> mcl-22-282+ds/doc/mclcm.txt
> dpkg-source: error: aborting due to unexpected upstream changes, see
> /tmp/mcl_22-282+ds-2.diff.QjB7ae
> dpkg-source: info: Hint: make sure the version in debian/changelog matches
> the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source
> --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
>
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage
> --sanitize-env -us -uc -rfakeroot -S' failed to run.
The full build log is available from:
http://qa-logs.debian.net/2023/08/13/mcl_22-282+ds-2_unstable.log
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: mcl
Source-Version: 1:22-282+ds-3
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
mcl, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1046...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated mcl package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 23 Dec 2024 16:14:18 +0100
Source: mcl
Architecture: source
Version: 1:22-282+ds-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Closes: 1046152
Changes:
mcl (1:22-282+ds-3) unstable; urgency=medium
.
* Move external code in a separate subdirectory
* Save backup of changed docs to restore it in clean target
Closes: #1046152
* Standards-Version: 4.7.0 (routine-update)
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