Your message dated Thu, 24 Feb 2022 10:48:44 +0000 with message-id <e1nnbfw-0000np...@fasolo.debian.org> and subject line Bug#1005805: fixed in castxml 0.4.4-1 has caused the Debian Bug report #1005805, regarding insighttoolkit4: FTBFS with glibc 2.34 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1005805: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1005805 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: insighttoolkit4 Version: 4.13.3withdata-dfsg2-1 Severity: important Tags: ftbfs Forwarded: https://github.com/InsightSoftwareConsortium/ITK/issues/2827 Control: affects -1 src:castxml Hi Maintainer insighttoolkit4 FTBFS when built with glibc 2.34, currently in experimental. I've copied what I hope is the relevant part of the log below. As can be seen in the forwarded bug report, the solution is to upgrade castxml to at least version 0.4.4 and castxml also needs to be built with LLVM/Clang 13. Regards Graham [ 19%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+vnl_rational-.cxx.o cd /<<PKGBUILDDIR>>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<<PKGBUILDDIR>>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<<PKGBUILDDIR>>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<<PKGBUILDDIR>>/Modules/ThirdParty/VNL/src/vxl/core -I/<<PKGBUILDDIR>>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<<PKGBUILDDIR>>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<<PKGBUILDDIR>>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<<PKGBUILDDIR>>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -g1 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -w -fPIC -Wno-undefined-var-template -msse2 -MD -MT Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+vnl_rational-.cxx.o -MF CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+vnl_rational-.cxx.o.d -o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+vnl_rational-.cxx.o -c /<<PKGBUILDDIR>>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_file_matrix+vnl_rational-.cxx In file included from /<<PKGBUILDDIR>>/BUILD/Wrapping/ITKCommonBase.cxx:1: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkCommand.h:21: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkObject.h:31: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkLightObject.h:21: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkMacro.h:47: In file included from /usr/include/c++/11/string:40: In file included from /usr/include/c++/11/bits/char_traits.h:40: In file included from /usr/include/c++/11/bits/postypes.h:40: In file included from /usr/include/c++/11/cwchar:44: /usr/include/wchar.h:155:24: error: use of undeclared identifier '__builtin_free'; did you mean '__builtin_frexp'? __attribute_malloc__ __attr_dealloc_free; ^ /usr/include/x86_64-linux-gnu/sys/cdefs.h:691:46: note: expanded from macro '__attr_dealloc_free' # define __attr_dealloc_free __attr_dealloc (__builtin_free, 1) ^ /usr/include/wchar.h:155:24: note: '__builtin_frexp' declared here /usr/include/x86_64-linux-gnu/sys/cdefs.h:691:46: note: expanded from macro '__attr_dealloc_free' # define __attr_dealloc_free __attr_dealloc (__builtin_free, 1) ^ In file included from /<<PKGBUILDDIR>>/BUILD/Wrapping/ITKCommonBase.cxx:1: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkCommand.h:21: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkObject.h:31: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkLightObject.h:21: In file included from /<<PKGBUILDDIR>>/Modules/Core/Common/include/itkMacro.h:47: In file included from /usr/include/c++/11/string:40: In file included from /usr/include/c++/11/bits/char_traits.h:40: In file included from /usr/include/c++/11/bits/postypes.h:40: In file included from /usr/include/c++/11/cwchar:44: /usr/include/wchar.h:155:24: error: '__malloc__' attribute takes no arguments __attribute_malloc__ __attr_dealloc_free; ^ /usr/include/x86_64-linux-gnu/sys/cdefs.h:691:30: note: expanded from macro '__attr_dealloc_free' # define __attr_dealloc_free __attr_dealloc (__builtin_free, 1) ^ /usr/include/x86_64-linux-gnu/sys/cdefs.h:690:21: note: expanded from macro '__attr_dealloc' __attribute__ ((__malloc__ (dealloc, argno)))
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--- Begin Message ---Source: castxml Source-Version: 0.4.4-1 Done: Étienne Mollier <emoll...@debian.org> We believe that the bug you reported is fixed in the latest version of castxml, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1005...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Étienne Mollier <emoll...@debian.org> (supplier of updated castxml package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Tue, 15 Feb 2022 20:36:32 +0100 Source: castxml Architecture: source Version: 0.4.4-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Étienne Mollier <emoll...@debian.org> Closes: 1000931 1005805 Changes: castxml (0.4.4-1) unstable; urgency=medium . [ Gert Wollny ] * d/ci: delete created files . [ Étienne Mollier ] * New upstream version 0.4.4. (Closes: #1005805) * Standards-Version: 4.6.0 (routine-update) * watch file standard 4 (routine-update) * d/control: bump build dependency to llvm 13 (Closes: #1000931) * d/copyright: bump copyright years * d/copyright: remove reference to src/kwsys/* files * d/control: add myself to uploaders * d/control: set Debian Med as maintainer and move Steve to uploaders. Thanks Steve M. Robbins for the original packaging! Checksums-Sha1: cba4f07c183cbda6b5a36e5107ebd6d7a197df6a 2071 castxml_0.4.4-1.dsc 7c2373769ba31784f34ac0347296e2378cc7c9c7 103796 castxml_0.4.4.orig.tar.gz e12f9d3002171d81203e11dbc2fcc180600a3f76 4684 castxml_0.4.4-1.debian.tar.xz 226089586d92f36d4216d48b0ff2a6eadfb32afc 8146 castxml_0.4.4-1_amd64.buildinfo Checksums-Sha256: be9bc51b624a29f13f5ea942b5c689daf6e2d34d0399afc21459f341f3affe9c 2071 castxml_0.4.4-1.dsc e7343edf262b291a9a3d702dbfa6d660e8ed81170454eab6af10a6dbf8c8141d 103796 castxml_0.4.4.orig.tar.gz 9805cb5f19cd47a68fdbaaa4acaedda01f499cb04de1d53fcb98ec96c38a8b72 4684 castxml_0.4.4-1.debian.tar.xz e0adce60b96fd607ed03a9725dd87b0739df8cf688555a42ab9e16262c44e1e0 8146 castxml_0.4.4-1_amd64.buildinfo Files: 0dfa7d3e02fade3387a52c865dfb6d7b 2071 devel optional castxml_0.4.4-1.dsc 1d23997b7ca7e68667ac348f66a44d71 103796 devel optional castxml_0.4.4.orig.tar.gz 25d00ca626f725605527a50f77171abd 4684 devel optional castxml_0.4.4-1.debian.tar.xz 3857910df063ba1467592f66d9629143 8146 devel optional castxml_0.4.4-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmIXXLIUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqAshAAwaGXm5Su3W7gbUXFZNK1QeXVEnLR zEpFcvHyBSq7ztCLIZN/GZGgQ8zGXOq+j7FJkkZ8Zxiku+N/nvtSIVv2BRBekAMp qSO7atU5WckvuuZY0Vn0UvxenKKHKmoB7/ZjJu0x8jMjt83equZTrtRBVCwzXR5r EWucd9z2TAYDvA8sdw4Oi34PMgwClL3hVtaXj4a8kmGtS0f+IqZS6zwYDs2KG4gU Z0qA26fA4Ue4tYwv8F2HiL4L4Yb+YaUamUbWzCWDpyvIih4Glw/2RTeHk+tnhQGL 8bzgy9WVEscY53hZJyAnS/ECHFQ537VlAqEnNakLJo5GzGeCmqRJHTiGH41D0i6V TBLICVNiwaY/BHvZQuhlDJEZAU+Ps2lTEUXjCgMtJUezLjdp0byMtM/UW3HqoB3j XDrwwrpEANi64xngFQRP1zJwG3LCAwd5XKK6jbHYUyx5y2Zw/bec4srb372owOeA /ov1LGzRg2zls7U9erYnky/eOWgUGl71RyKm+jXynwj6hxzB/UhoVDCIL8WGhpFo D+wuTUt3aM0qNm0oTW6r1roncsLRpL3KK//PS21BcaO0g10SZrd8SYTr5fGjyUHx qNN4CzA8e4/o/MB0YehXTkZ3XNqMuCFIVURMpv/oCv2kNYyUuO8bnIViIMGdFNX6 XTrDXX4XwvoNnoM= =c/ZT -----END PGP SIGNATURE-----
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