Thanks, I have updated the config.guess and config.sub, and was able to run ./configure. However it gave me the message as follows. And I can run make (error 2, and error 5). Could you give me some advices on this?
./CONFIGURE ----------------------------------------- /cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib/ncbicfg.c is updated Prebuilt project_tree_builder not found =============================================================================== NCBI C++ Toolkit documentation: doc/index.html, doc/config.html#ref_Running For the available configuration flags run: ./configure --help CFLAGS = -Wall -Wno-format-y2k -O2 CXXFLAGS = -Wall -Wno-format-y2k -O2 CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE LDFLAGS = -Wl,-rpath,/usr/lib/gcc/x86_64-pc-cygwin/4.8.3 -O LIBRARIES: build as static only FEATURES: MT unix WinMain Cygwin CygwinMT PACKAGES: enabled: UUID Z BZ2 LZO PCRE GNUTLS OPENSSL MySQL BerkeleyDB BerkeleyDB++ PYTHON Boost.Spirit Boost.Test.Included OpenGL MESA GLUT ICU EXPAT LIBXML LIBXSLT Xerces SQLITE3 HDF5 JPEG PNG TIFF GIF XPM FreeType disabled: LocalZ LocalBZ2 LocalPCRE Sybase DBLib FreeTDS ODBC PYTHON23 PYTHON24 PYTHON25 CPPUNIT Boost.Regex Boost.Test Boost.Threads C-Toolkit FLTK wxWindows wxWidgets wx2.8 Fast-CGI LocalSSS LocalNCBILS LocalMSGMAIL2 SSSUTILS SSSDB SP ORBacus SABLOT Xalan SQLITE SQLITE3ASYNC OECHEM SGE MUPARSER UNGIF PROJECTS: enabled: cgi connext ncbi_crypt serial objects dbapi app algo disabled: local_lbsm bdb ctools gui gbench Tools / flags / paths: /cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.mk Configuration header: /cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/inc/ncbiconf_unix.h To build everything: cd /cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build && make all_r or simply run make in the current directory ******* CONFIGURATION SUCCESSFUL ******* -------------------------------- MAKE make[6]: Leaving directory '/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib' /cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.meta:191: recipe for target 'all.nonusr' failed make[5]: *** [all.nonusr] Error 2 make[5]: Leaving directory '/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib' /cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.meta:183: recipe for target 'all.real' failed make[4]: *** [all.real] Error 2 make[4]: Leaving directory '/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib' /cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.meta:241: recipe for target 'all_r.needs-reqs' failed make[3]: *** [all_r.needs-reqs] Error 2 make[3]: Leaving directory '/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib' Makefile.meta:290: recipe for target 'all_r.real' failed make[2]: *** [all_r.real] Error 5 make[2]: Leaving directory '/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build' Makefile.meta:241: recipe for target 'all_r.needs-reqs' failed make[1]: *** [all_r.needs-reqs] Error 2 make[1]: Leaving directory '/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build' Makefile:22: recipe for target 'all' failed make: *** [all] Error 2 ----------------------------------- Thank you very much. -----Original Message----- From: Yann Droneaud [mailto:ydrone...@opteya.com] Sent: Friday, 13 June 2014 11:28 PM To: Van Nam Hoang Cc: config-patches@gnu.org Subject: Re: confiig.guess problem Hi, Le vendredi 13 juin 2014 à 12:08 +0000, Van Nam Hoang a écrit : > config.guess timestamp = 2003-02-22 > commit 64c794e628df3db19e11f10ae876f71cef815603 Author: Ben Elliston <b...@gnu.org> Date: Thu Feb 10 03:37:55 2005 +0000 * config.guess (amd64:CYGWIN*:*:*): New. * testsuite/config-sub.data: Add amd64-cygwin, x86_64-cygwin. * testsuite/config-guess.data: Add x86_64-unknown-cygwin test. So try to grab an updated config.guess script released after 2005-02-10. > > > uname -m = x86_64 > > uname -r = 1.7.30(0.272/5/3) > > uname -s = CYGWIN_NT-6.1 > > uname -v = 2014-05-23 10:36 > > > > /usr/bin/uname -p = unknown > > /bin/uname -X = > > > > hostinfo = > > /bin/universe = > > /usr/bin/arch -k = > > /bin/arch = x86_64 > > /usr/bin/oslevel = > > /usr/convex/getsysinfo = > > > > UNAME_MACHINE = x86_64 > > UNAME_RELEASE = 1.7.30(0.272/5/3) > > UNAME_SYSTEM = CYGWIN_NT-6.1 > > UNAME_VERSION = 2014-05-23 10:36 > > configure: error: cannot guess build type; you must specify one Regards. -- Yann Droneaud OPTEYA _______________________________________________ config-patches mailing list config-patches@gnu.org https://lists.gnu.org/mailman/listinfo/config-patches
