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lburgazzoli pushed a commit to branch master
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The following commit(s) were added to refs/heads/master by this push:
new aec0003 Add FHIR extension
aec0003 is described below
commit aec00039908d167bc48359afa1398baf4c50b436
Author: John Poth <poth.j...@gmail.com>
AuthorDate: Tue Oct 15 12:56:01 2019 +0200
Add FHIR extension
---
docs/modules/ROOT/pages/extensions/fhir.adoc | 34 +++++
.../pages/list-of-camel-quarkus-extensions.adoc | 11 +-
extensions/fhir/deployment/pom.xml | 61 ++++++++
.../component/fhir/deployment/FhirProcessor.java | 165 +++++++++++++++++++++
extensions/fhir/pom.xml | 21 +++
extensions/fhir/runtime/pom.xml | 72 +++++++++
.../camel/quarkus/component/fhir/FhirFlags.java | 46 ++++++
.../main/resources/META-INF/quarkus-extension.json | 10 ++
extensions/pom.xml | 1 +
extensions/readme.adoc | 11 +-
integration-tests/fhir/pom.xml | 146 ++++++++++++++++++
.../component/fhir/it/FhirDstu2Resource.java | 74 +++++++++
.../component/fhir/it/FhirDstu2RouteBuilder.java | 49 ++++++
.../component/fhir/it/FhirDstu3Resource.java | 74 +++++++++
.../component/fhir/it/FhirDstu3RouteBuilder.java | 49 ++++++
.../quarkus/component/fhir/it/FhirR4Resource.java | 74 +++++++++
.../component/fhir/it/FhirR4RouteBuilder.java | 50 +++++++
.../fhir/src/main/resources/application.properties | 40 +++++
.../camel/quarkus/component/fhir/it/FhirIT.java | 24 +++
.../camel/quarkus/component/fhir/it/FhirTest.java | 165 +++++++++++++++++++++
integration-tests/pom.xml | 1 +
pom.xml | 1 +
poms/bom-deployment/pom.xml | 5 +
poms/bom/pom.xml | 21 +++
24 files changed, 1201 insertions(+), 4 deletions(-)
diff --git a/docs/modules/ROOT/pages/extensions/fhir.adoc
b/docs/modules/ROOT/pages/extensions/fhir.adoc
new file mode 100644
index 0000000..871f3b7
--- /dev/null
+++ b/docs/modules/ROOT/pages/extensions/fhir.adoc
@@ -0,0 +1,34 @@
+[[fhir]]
+= FHIR Extension
+
+*Available as of Camel Quarkus version 0.21*
+
+The FHIR extension integrates with the
+http://hapifhir.io/[HAPI-FHIR] library which is an open-source implementation
of the
+http://hl7.org/implement/standards/fhir/[FHIR] (Fast Healthcare
Interoperability Resources) specification in Java.
+
+Maven users will need to add the following dependency to their `pom.xml` for
this extension.
+
+[source,xml]
+------------------------------------------------------------
+<dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-fhir</artifactId>
+</dependency>
+------------------------------------------------------------
+
+== Usage
+
+The extension supports the Camel
https://camel.apache.org/components/latest/fhirJson-dataformat.html[FHIR Json
Dataformat],
https://camel.apache.org/components/latest/fhirXml-dataformat.html[FHIR XML
Dataformat] and
https://camel.apache.org/components/latest/fhir-component.html[FHIR Component].
DSTU2, DSTU3 and R4 are supported.
+
+=== Configuration
+
+The https://hapifhir.io/download.html[hapi-fhir] library, on which camel-fhir
depends on, heavily uses reflection which affects performance in Quarkus
(memory footprint, build time, CPU resources etc...). The following options are
provided to improve on this:
+
+* `camel.fhir.enable-dstu2`: enables dstu2 resources, default `true`
+* `camel.fhir.enable-dstu3`: enables dstu3 resources, default `true`
+* `camel.fhir.enable-r4`: : enables r4 resources, default `true`
+
+which can be configured within the `application.properties` configuration file.
+
+Enjoy !
\ No newline at end of file
diff --git a/docs/modules/ROOT/pages/list-of-camel-quarkus-extensions.adoc
b/docs/modules/ROOT/pages/list-of-camel-quarkus-extensions.adoc
index 444584e..d82a469 100644
--- a/docs/modules/ROOT/pages/list-of-camel-quarkus-extensions.adoc
+++ b/docs/modules/ROOT/pages/list-of-camel-quarkus-extensions.adoc
@@ -6,7 +6,7 @@ As of Camel Quarkus {camel-quarkus-last-release} the following
Camel artifacts a
== Camel Components
// components: START
-Number of Camel components: 22 in 18 JAR artifacts (0 deprecated)
+Number of Camel components: 23 in 19 JAR artifacts (0 deprecated)
[width="100%",cols="4,1,5",options="header"]
|===
@@ -33,6 +33,9 @@ Number of Camel components: 22 in 18 JAR artifacts (0
deprecated)
|
link:https://camel.apache.org/components/latest/direct-component.html[Direct]
(camel-quarkus-direct) +
`direct:name` | 0.2 | The direct component provides direct, synchronous call
to another endpoint from the same CamelContext.
+| link:https://camel.apache.org/components/latest/fhir-component.html[FHIR]
(camel-quarkus-fhir) +
+`fhir:apiName/methodName` | 0.2 | The fhir component is used for working with
the FHIR protocol (health care).
+
|
link:https://camel.apache.org/components/latest/infinispan-component.html[Infinispan]
(camel-quarkus-infinispan) +
`infinispan:cacheName` | 0.2 | For reading/writing from/to Infinispan
distributed key/value store and data grid.
@@ -84,7 +87,7 @@ Number of Camel components: 22 in 18 JAR artifacts (0
deprecated)
== Camel Data Formats
// dataformats: START
-Number of Camel data formats: 4 in 4 JAR artifacts (0 deprecated)
+Number of Camel data formats: 6 in 5 JAR artifacts (0 deprecated)
[width="100%",cols="4,1,5",options="header"]
|===
@@ -92,6 +95,10 @@ Number of Camel data formats: 4 in 4 JAR artifacts (0
deprecated)
| link:https://camel.apache.org/components/latest/csv-dataformat.html[CSV]
(camel-quarkus-csv) | 0.2 | The CSV data format is used for handling CSV
payloads.
+|
link:https://camel.apache.org/components/latest/fhirJson-dataformat.html[FHIR
JSon] (camel-quarkus-fhir) | 0.2 | The FHIR JSon data format is used to
marshall/unmarshall to/from FHIR objects to/from JSON.
+
+| link:https://camel.apache.org/components/latest/fhirXml-dataformat.html[FHIR
XML] (camel-quarkus-fhir) | 0.2 | The FHIR XML data format is used to
marshall/unmarshall from/to FHIR objects to/from XML.
+
|
link:https://camel.apache.org/components/latest/mime-multipart-dataformat.html[MIME
Multipart] (camel-quarkus-mail) | 0.2 | The MIME Multipart data format is used
for marshalling Camel messages with attachments into MIME-Multipart message,
and vise-versa.
| link:https://camel.apache.org/components/latest/tarfile-dataformat.html[Tar
File] (camel-quarkus-tarfile) | 0.3 | The Tar File data format is a message
compression and de-compression format of tar files.
diff --git a/extensions/fhir/deployment/pom.xml
b/extensions/fhir/deployment/pom.xml
new file mode 100644
index 0000000..b4505ba
--- /dev/null
+++ b/extensions/fhir/deployment/pom.xml
@@ -0,0 +1,61 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0";
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/xsd/maven-4.0.0.xsd";>
+ <modelVersion>4.0.0</modelVersion>
+ <parent>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-fhir-parent</artifactId>
+ <version>0.2.1-SNAPSHOT</version>
+ <relativePath>../pom.xml</relativePath>
+ </parent>
+
+ <artifactId>camel-quarkus-fhir-deployment</artifactId>
+ <name>Camel Quarkus :: FHIR :: Deployment</name>
+
+ <dependencyManagement>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-bom-deployment</artifactId>
+ <version>${project.version}</version>
+ <type>pom</type>
+ <scope>import</scope>
+ </dependency>
+ </dependencies>
+ </dependencyManagement>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-core-deployment</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-core-xml-deployment</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-fhir</artifactId>
+ </dependency>
+ </dependencies>
+
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.apache.maven.plugins</groupId>
+ <artifactId>maven-compiler-plugin</artifactId>
+ <configuration>
+ <annotationProcessorPaths>
+ <path>
+ <groupId>io.quarkus</groupId>
+
<artifactId>quarkus-extension-processor</artifactId>
+ <version>${quarkus.version}</version>
+ </path>
+ </annotationProcessorPaths>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+
+</project>
diff --git
a/extensions/fhir/deployment/src/main/java/org/apache/camel/quarkus/component/fhir/deployment/FhirProcessor.java
b/extensions/fhir/deployment/src/main/java/org/apache/camel/quarkus/component/fhir/deployment/FhirProcessor.java
new file mode 100644
index 0000000..b2c52bf
--- /dev/null
+++
b/extensions/fhir/deployment/src/main/java/org/apache/camel/quarkus/component/fhir/deployment/FhirProcessor.java
@@ -0,0 +1,165 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.deployment;
+
+import java.io.InputStream;
+import java.util.Collection;
+import java.util.HashSet;
+import java.util.Properties;
+import java.util.Set;
+import ca.uhn.fhir.model.dstu2.FhirDstu2;
+import io.quarkus.deployment.annotations.BuildProducer;
+import io.quarkus.deployment.annotations.BuildStep;
+import io.quarkus.deployment.builditem.ExtensionSslNativeSupportBuildItem;
+import io.quarkus.deployment.builditem.FeatureBuildItem;
+import io.quarkus.deployment.builditem.substrate.ReflectiveClassBuildItem;
+import io.quarkus.deployment.builditem.substrate.SubstrateResourceBuildItem;
+import
io.quarkus.deployment.builditem.substrate.SubstrateResourceBundleBuildItem;
+import org.apache.camel.component.fhir.FhirCapabilitiesEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirConfiguration;
+import org.apache.camel.component.fhir.FhirCreateEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirDeleteEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirHistoryEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirLoadPageEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirMetaEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirOperationEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirPatchEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirReadEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirSearchEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirTransactionEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirUpdateEndpointConfiguration;
+import org.apache.camel.component.fhir.FhirValidateEndpointConfiguration;
+import org.apache.camel.quarkus.component.fhir.FhirFlags;
+import org.hl7.fhir.dstu3.hapi.ctx.FhirDstu3;
+import org.hl7.fhir.dstu3.model.Enumerations;
+
+class FhirProcessor {
+
+ private static final String FEATURE = "camel-fhir";
+
+ @BuildStep
+ FeatureBuildItem feature() {
+ return new FeatureBuildItem(FEATURE);
+ }
+
+ @BuildStep
+ ExtensionSslNativeSupportBuildItem activateSslNativeSupport() {
+ return new ExtensionSslNativeSupportBuildItem(FEATURE);
+ }
+
+
+ @BuildStep()
+ ReflectiveClassBuildItem fhirEndpointConfiguration() {
+ return new ReflectiveClassBuildItem(true, true,
+ FhirCreateEndpointConfiguration.class.getCanonicalName(),
+ FhirCapabilitiesEndpointConfiguration.class.getCanonicalName(),
+ FhirDeleteEndpointConfiguration.class.getCanonicalName(),
+ FhirHistoryEndpointConfiguration.class.getCanonicalName(),
+ FhirLoadPageEndpointConfiguration.class.getCanonicalName(),
+ FhirMetaEndpointConfiguration.class.getCanonicalName(),
+ FhirOperationEndpointConfiguration.class.getCanonicalName(),
+ FhirPatchEndpointConfiguration.class.getCanonicalName(),
+ FhirReadEndpointConfiguration.class.getCanonicalName(),
+ FhirSearchEndpointConfiguration.class.getCanonicalName(),
+ FhirTransactionEndpointConfiguration.class.getCanonicalName(),
+ FhirUpdateEndpointConfiguration.class.getCanonicalName(),
+ FhirValidateEndpointConfiguration.class.getCanonicalName(),
+ FhirConfiguration.class.getCanonicalName());
+ }
+
+ @BuildStep()
+ SubstrateResourceBundleBuildItem hapiMessages() {
+ return new
SubstrateResourceBundleBuildItem("ca.uhn.fhir.i18n.hapi-messages");
+ }
+
+ @BuildStep
+ ReflectiveClassBuildItem xmlOutputFactory() {
+ return new ReflectiveClassBuildItem(false, false,
+ "com.sun.xml.internal.stream.XMLOutputFactoryImpl");
+ }
+
+ @BuildStep(applicationArchiveMarkers = {"org/hl7/fhir", "ca/uhn/fhir"})
+ void processFhir(BuildProducer<ReflectiveClassBuildItem> reflectiveClass,
BuildProducer<SubstrateResourceBuildItem> resource) {
+ Set<String> classes = new HashSet<>();
+
classes.add("ca.uhn.fhir.rest.client.apache.ApacheRestfulClientFactory");
+
classes.add("ca.uhn.fhir.validation.schematron.SchematronBaseValidator");
+ classes.add("org.apache.commons.logging.impl.LogFactoryImpl");
+ classes.add("org.apache.commons.logging.LogFactory");
+ classes.add("org.apache.commons.logging.impl.Jdk14Logger");
+ reflectiveClass.produce(new ReflectiveClassBuildItem(true, false,
true, classes.toArray(new String[0])));
+ }
+
+ @BuildStep(onlyIf = FhirFlags.Dstu2Enabled.class,
applicationArchiveMarkers = {"org/hl7/fhir", "ca/uhn/fhir"})
+ void processDstu2(BuildProducer<ReflectiveClassBuildItem> reflectiveClass,
BuildProducer<SubstrateResourceBuildItem> resource) {
+ Set<String> classes = new HashSet<>();
+ classes.add(FhirDstu2.class.getCanonicalName());
+
classes.addAll(getModelClasses("/ca/uhn/fhir/model/dstu2/fhirversion.properties"));
+
+ reflectiveClass.produce(new ReflectiveClassBuildItem(true, false,
true, classes.toArray(new String[0])));
+ resource.produce(new
SubstrateResourceBuildItem("ca/uhn/fhir/model/dstu2/fhirversion.properties"));
+ }
+
+ @BuildStep(onlyIf = FhirFlags.Dstu3Enabled.class,
applicationArchiveMarkers = {"org/hl7/fhir", "ca/uhn/fhir"})
+ void processDstu3(BuildProducer<ReflectiveClassBuildItem> reflectiveClass,
BuildProducer<SubstrateResourceBuildItem> resource) {
+ Set<String> classes = new HashSet<>();
+ classes.add(FhirDstu3.class.getCanonicalName());
+
classes.addAll(getModelClasses("/org/hl7/fhir/dstu3/model/fhirversion.properties"));
+ classes.addAll(getInnerClasses(Enumerations.class.getCanonicalName()));
+
+ reflectiveClass.produce(new ReflectiveClassBuildItem(true, false,
true, classes.toArray(new String[0])));
+ resource.produce(new
SubstrateResourceBuildItem("org/hl7/fhir/dstu3/model/fhirversion.properties"));
+ }
+
+ @BuildStep(onlyIf = FhirFlags.R4Enabled.class, applicationArchiveMarkers =
{"org/hl7/fhir", "ca/uhn/fhir"})
+ void processR4(BuildProducer<ReflectiveClassBuildItem> reflectiveClass,
BuildProducer<SubstrateResourceBuildItem> resource) {
+ Set<String> classes = new HashSet<>();
+ classes.add("org.hl7.fhir.r4.hapi.ctx.FhirR4");
+
classes.addAll(getModelClasses("/org/hl7/fhir/r4/model/fhirversion.properties"));
+
classes.addAll(getInnerClasses(org.hl7.fhir.r4.model.Enumerations.class.getCanonicalName()));
+
+ reflectiveClass.produce(new ReflectiveClassBuildItem(true, false,
true, classes.toArray(new String[0])));
+ resource.produce(new
SubstrateResourceBuildItem("org/hl7/fhir/r4/model/fhirversion.properties"));
+ }
+
+ private Collection<String> getModelClasses(String model) {
+ try (InputStream str = FhirDstu3.class.getResourceAsStream(model)) {
+ Properties prop = new Properties();
+ prop.load(str);
+ return getInnerClasses(prop.values().toArray(new String[0]));
+ } catch (Exception e) {
+ throw new RuntimeException("Please ensure FHIR is on the
classpath", e);
+ }
+ }
+
+ private Collection<String> getInnerClasses(String... classList) {
+ try {
+ Set<String> classes = new HashSet<>();
+ for (Object value : classList) {
+ String clazz = (String) value;
+ final Class[] parent = Class.forName(clazz).getClasses();
+ for (Class aClass : parent) {
+ String name = aClass.getName();
+ classes.add(name);
+ }
+ classes.add(clazz);
+ }
+ return classes;
+ } catch (ClassNotFoundException e) {
+ throw new RuntimeException("Please ensure FHIR is on the
classpath", e);
+ }
+ }
+}
diff --git a/extensions/fhir/pom.xml b/extensions/fhir/pom.xml
new file mode 100644
index 0000000..0110618
--- /dev/null
+++ b/extensions/fhir/pom.xml
@@ -0,0 +1,21 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0";
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/xsd/maven-4.0.0.xsd";>
+ <modelVersion>4.0.0</modelVersion>
+ <parent>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-build-parent</artifactId>
+ <version>0.2.1-SNAPSHOT</version>
+ <relativePath>../../poms/build-parent/pom.xml</relativePath>
+ </parent>
+
+ <artifactId>camel-quarkus-fhir-parent</artifactId>
+ <name>Camel Quarkus :: FHIR</name>
+ <packaging>pom</packaging>
+
+ <modules>
+ <module>deployment</module>
+ <module>runtime</module>
+ </modules>
+</project>
diff --git a/extensions/fhir/runtime/pom.xml b/extensions/fhir/runtime/pom.xml
new file mode 100644
index 0000000..7971bb8
--- /dev/null
+++ b/extensions/fhir/runtime/pom.xml
@@ -0,0 +1,72 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0";
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/xsd/maven-4.0.0.xsd";>
+ <modelVersion>4.0.0</modelVersion>
+ <parent>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-fhir-parent</artifactId>
+ <version>0.2.1-SNAPSHOT</version>
+ <relativePath>../pom.xml</relativePath>
+ </parent>
+
+ <artifactId>camel-quarkus-fhir</artifactId>
+ <name>Camel Quarkus :: FHIR :: Runtime</name>
+
+ <dependencyManagement>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-bom</artifactId>
+ <version>${project.version}</version>
+ <type>pom</type>
+ <scope>import</scope>
+ </dependency>
+ </dependencies>
+ </dependencyManagement>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-core</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-core-xml</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel</groupId>
+ <artifactId>camel-fhir</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>ca.uhn.hapi.fhir</groupId>
+ <artifactId>hapi-fhir-structures-r4</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.jboss.logging</groupId>
+ <artifactId>commons-logging-jboss-logging</artifactId>
+ </dependency>
+ </dependencies>
+
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>io.quarkus</groupId>
+ <artifactId>quarkus-bootstrap-maven-plugin</artifactId>
+ </plugin>
+ <plugin>
+ <groupId>org.apache.maven.plugins</groupId>
+ <artifactId>maven-compiler-plugin</artifactId>
+ <configuration>
+ <annotationProcessorPaths>
+ <path>
+ <groupId>io.quarkus</groupId>
+
<artifactId>quarkus-extension-processor</artifactId>
+ <version>${quarkus.version}</version>
+ </path>
+ </annotationProcessorPaths>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+</project>
diff --git
a/extensions/fhir/runtime/src/main/java/org/apache/camel/quarkus/component/fhir/FhirFlags.java
b/extensions/fhir/runtime/src/main/java/org/apache/camel/quarkus/component/fhir/FhirFlags.java
new file mode 100644
index 0000000..0a3af8e
--- /dev/null
+++
b/extensions/fhir/runtime/src/main/java/org/apache/camel/quarkus/component/fhir/FhirFlags.java
@@ -0,0 +1,46 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir;
+
+import java.util.function.BooleanSupplier;
+import org.eclipse.microprofile.config.ConfigProvider;
+
+public final class FhirFlags {
+ private FhirFlags() {
+ }
+
+ public static final class Dstu2Enabled implements BooleanSupplier {
+ @Override
+ public boolean getAsBoolean() {
+ return
ConfigProvider.getConfig().getOptionalValue("camel.fhir.enable-dstu2",
Boolean.class).orElse(Boolean.TRUE);
+ }
+ }
+
+ public static final class Dstu3Enabled implements BooleanSupplier {
+ @Override
+ public boolean getAsBoolean() {
+ return
ConfigProvider.getConfig().getOptionalValue("camel.fhir.enable-dstu3",
Boolean.class).orElse(Boolean.TRUE);
+ }
+ }
+
+ public static final class R4Enabled implements BooleanSupplier {
+ @Override
+ public boolean getAsBoolean() {
+ return
ConfigProvider.getConfig().getOptionalValue("camel.fhir.enable-r4",
Boolean.class).orElse(Boolean.TRUE);
+ }
+ }
+}
\ No newline at end of file
diff --git
a/extensions/fhir/runtime/src/main/resources/META-INF/quarkus-extension.json
b/extensions/fhir/runtime/src/main/resources/META-INF/quarkus-extension.json
new file mode 100644
index 0000000..8c3daaf
--- /dev/null
+++ b/extensions/fhir/runtime/src/main/resources/META-INF/quarkus-extension.json
@@ -0,0 +1,10 @@
+{
+ "name": "Camel Quarkus FHIR",
+ "labels": [
+ "integration",
+ "camel",
+ "healthcare"
+ ],
+ "guide": "https://quarkus.io/guides/camel";
+}
+
diff --git a/extensions/pom.xml b/extensions/pom.xml
index 4da29c1..2833d8e 100644
--- a/extensions/pom.xml
+++ b/extensions/pom.xml
@@ -50,6 +50,7 @@
<module>bean</module>
<module>csv</module>
<module>direct</module>
+ <module>fhir</module>
<module>infinispan</module>
<module>jdbc</module>
<module>log</module>
diff --git a/extensions/readme.adoc b/extensions/readme.adoc
index 92bce7a..d9d4749 100644
--- a/extensions/readme.adoc
+++ b/extensions/readme.adoc
@@ -5,7 +5,7 @@ Apache Camel Quarkus supports the following Camel artifacts as
Quarkus Extension
== Camel Components
// components: START
-Number of Camel components: 22 in 18 JAR artifacts (0 deprecated)
+Number of Camel components: 23 in 19 JAR artifacts (0 deprecated)
[width="100%",cols="4,1,5",options="header"]
|===
@@ -32,6 +32,9 @@ Number of Camel components: 22 in 18 JAR artifacts (0
deprecated)
|
link:https://camel.apache.org/components/latest/direct-component.html[Direct]
(camel-quarkus-direct) +
`direct:name` | 0.2 | The direct component provides direct, synchronous call
to another endpoint from the same CamelContext.
+| link:https://camel.apache.org/components/latest/fhir-component.html[FHIR]
(camel-quarkus-fhir) +
+`fhir:apiName/methodName` | 0.2 | The fhir component is used for working with
the FHIR protocol (health care).
+
|
link:https://camel.apache.org/components/latest/infinispan-component.html[Infinispan]
(camel-quarkus-infinispan) +
`infinispan:cacheName` | 0.2 | For reading/writing from/to Infinispan
distributed key/value store and data grid.
@@ -84,7 +87,7 @@ Number of Camel components: 22 in 18 JAR artifacts (0
deprecated)
== Camel Data Formats
// dataformats: START
-Number of Camel data formats: 4 in 4 JAR artifacts (0 deprecated)
+Number of Camel data formats: 6 in 5 JAR artifacts (0 deprecated)
[width="100%",cols="4,1,5",options="header"]
|===
@@ -92,6 +95,10 @@ Number of Camel data formats: 4 in 4 JAR artifacts (0
deprecated)
| link:https://camel.apache.org/components/latest/csv-dataformat.html[CSV]
(camel-quarkus-csv) | 0.2 | The CSV data format is used for handling CSV
payloads.
+|
link:https://camel.apache.org/components/latest/fhirJson-dataformat.html[FHIR
JSon] (camel-quarkus-fhir) | 0.2 | The FHIR JSon data format is used to
marshall/unmarshall to/from FHIR objects to/from JSON.
+
+| link:https://camel.apache.org/components/latest/fhirXml-dataformat.html[FHIR
XML] (camel-quarkus-fhir) | 0.2 | The FHIR XML data format is used to
marshall/unmarshall from/to FHIR objects to/from XML.
+
|
link:https://camel.apache.org/components/latest/mime-multipart-dataformat.html[MIME
Multipart] (camel-quarkus-mail) | 0.2 | The MIME Multipart data format is used
for marshalling Camel messages with attachments into MIME-Multipart message,
and vise-versa.
| link:https://camel.apache.org/components/latest/tarfile-dataformat.html[Tar
File] (camel-quarkus-tarfile) | 0.3 | The Tar File data format is a message
compression and de-compression format of tar files.
diff --git a/integration-tests/fhir/pom.xml b/integration-tests/fhir/pom.xml
new file mode 100644
index 0000000..51ee3d8
--- /dev/null
+++ b/integration-tests/fhir/pom.xml
@@ -0,0 +1,146 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0";
+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance";
+ xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/xsd/maven-4.0.0.xsd";>
+ <modelVersion>4.0.0</modelVersion>
+ <parent>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-integration-tests</artifactId>
+ <version>0.2.1-SNAPSHOT</version>
+ </parent>
+
+ <artifactId>camel-quarkus-integration-test-fhir</artifactId>
+ <name>Camel Quarkus :: Integration Tests :: fhir</name>
+ <description>Integration tests for Camel Quarkus fhir
extension</description>
+
+ <dependencyManagement>
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-bom-deployment</artifactId>
+ <version>${project.version}</version>
+ <type>pom</type>
+ <scope>import</scope>
+ </dependency>
+ </dependencies>
+ </dependencyManagement>
+
+ <dependencies>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-fhir</artifactId>
+ <exclusions>
+ <exclusion>
+ <!-- Pulled in from junit5 -->
+ <groupId>org.slf4j</groupId>
+ <artifactId>jcl-over-slf4j</artifactId>
+ </exclusion>
+ </exclusions>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-log</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>io.quarkus</groupId>
+ <artifactId>quarkus-resteasy</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-direct</artifactId>
+ </dependency>
+ <dependency>
+ <groupId>io.quarkus</groupId>
+ <artifactId>quarkus-junit5</artifactId>
+ <scope>test</scope>
+ </dependency>
+ <dependency>
+ <groupId>io.rest-assured</groupId>
+ <artifactId>rest-assured</artifactId>
+ <scope>test</scope>
+ </dependency>
+ </dependencies>
+
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>io.quarkus</groupId>
+ <artifactId>quarkus-maven-plugin</artifactId>
+ <executions>
+ <execution>
+ <goals>
+ <goal>build</goal>
+ </goals>
+ </execution>
+ </executions>
+ </plugin>
+ <plugin>
+ <groupId>org.apache.maven.plugins</groupId>
+ <artifactId>maven-surefire-plugin</artifactId>
+ <configuration>
+ <systemProperties combine.children="append">
+ <camel.fhir.enable-dstu2>true</camel.fhir.enable-dstu2>
+ <camel.fhir.enable-r4>true</camel.fhir.enable-r4>
+ </systemProperties>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+
+ <profiles>
+ <profile>
+ <id>native-image</id>
+ <activation>
+ <property>
+ <name>native</name>
+ </property>
+ </activation>
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>org.apache.maven.plugins</groupId>
+ <artifactId>maven-failsafe-plugin</artifactId>
+ <executions>
+ <execution>
+ <goals>
+ <goal>integration-test</goal>
+ <goal>verify</goal>
+ </goals>
+ <configuration>
+ <systemProperties>
+
<native.image.path>${project.build.directory}/${project.build.finalName}-runner</native.image.path>
+ </systemProperties>
+ </configuration>
+ </execution>
+ </executions>
+ </plugin>
+ <plugin>
+ <groupId>io.quarkus</groupId>
+ <artifactId>quarkus-maven-plugin</artifactId>
+ <executions>
+ <execution>
+ <id>native-image</id>
+ <goals>
+ <goal>native-image</goal>
+ </goals>
+ <configuration>
+
<reportErrorsAtRuntime>false</reportErrorsAtRuntime>
+ <cleanupServer>true</cleanupServer>
+
<enableHttpsUrlHandler>true</enableHttpsUrlHandler>
+
<enableHttpUrlHandler>true</enableHttpUrlHandler>
+ <enableServer>false</enableServer>
+ <dumpProxies>false</dumpProxies>
+ <graalvmHome>${graalvmHome}</graalvmHome>
+ <enableJni>true</enableJni>
+
<enableAllSecurityServices>true</enableAllSecurityServices>
+ <disableReports>true</disableReports>
+ </configuration>
+ </execution>
+ </executions>
+ </plugin>
+ </plugins>
+ </build>
+ </profile>
+ </profiles>
+
+</project>
\ No newline at end of file
diff --git
a/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu2Resource.java
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu2Resource.java
new file mode 100644
index 0000000..fcc22ec
--- /dev/null
+++
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu2Resource.java
@@ -0,0 +1,74 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import javax.enterprise.context.ApplicationScoped;
+import javax.inject.Inject;
+import javax.ws.rs.Consumes;
+import javax.ws.rs.POST;
+import javax.ws.rs.Path;
+import javax.ws.rs.Produces;
+import javax.ws.rs.core.MediaType;
+import javax.ws.rs.core.Response;
+import java.io.InputStream;
+import java.net.URI;
+import ca.uhn.fhir.rest.api.MethodOutcome;
+import org.apache.camel.ProducerTemplate;
+
+@Path("/dstu2")
+@ApplicationScoped
+public class FhirDstu2Resource {
+
+ @Inject
+ ProducerTemplate producerTemplate;
+
+ @Path("/fhir2json")
+ @POST
+ @Consumes(MediaType.APPLICATION_JSON)
+ @Produces(MediaType.APPLICATION_OCTET_STREAM)
+ public Response fhir2json(String patient) throws Exception {
+ InputStream response =
producerTemplate.requestBody("direct:json-to-dstu2", patient,
InputStream.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(response)
+ .build();
+ }
+
+ @Path("/fhir2xml")
+ @POST
+ @Consumes(MediaType.APPLICATION_XML)
+ @Produces(MediaType.APPLICATION_OCTET_STREAM)
+ public Response fhir2xml(String patient) throws Exception {
+ InputStream response =
producerTemplate.requestBody("direct:xml-to-dstu2", patient, InputStream.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(response)
+ .build();
+ }
+
+ @Path("/createPatient")
+ @POST
+ @Consumes(MediaType.APPLICATION_JSON)
+ @Produces(MediaType.TEXT_PLAIN)
+ public Response createPatient(String patient) throws Exception {
+ MethodOutcome result =
producerTemplate.requestBody("direct:create-dstu2", patient,
MethodOutcome.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(result.getId().getIdPart())
+ .build();
+ }
+}
diff --git
a/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu2RouteBuilder.java
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu2RouteBuilder.java
new file mode 100644
index 0000000..06107eb
--- /dev/null
+++
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu2RouteBuilder.java
@@ -0,0 +1,49 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import ca.uhn.fhir.context.FhirVersionEnum;
+import org.apache.camel.builder.RouteBuilder;
+import org.apache.camel.component.fhir.FhirJsonDataFormat;
+import org.apache.camel.component.fhir.FhirXmlDataFormat;
+import org.apache.camel.quarkus.component.fhir.FhirFlags;
+
+public class FhirDstu2RouteBuilder extends RouteBuilder {
+
+ @Override
+ public void configure() {
+ Boolean dstu2 = new FhirFlags.Dstu2Enabled().getAsBoolean();;
+ if (dstu2) {
+ FhirJsonDataFormat fhirJsonDataFormat = new FhirJsonDataFormat();
+ fhirJsonDataFormat.setFhirVersion(FhirVersionEnum.DSTU2.name());
+
+ FhirXmlDataFormat fhirXmlDataFormat = new FhirXmlDataFormat();
+ fhirXmlDataFormat.setFhirVersion(FhirVersionEnum.DSTU2.name());
+
+ from("direct:json-to-dstu2")
+ .unmarshal(fhirJsonDataFormat)
+ .marshal(fhirJsonDataFormat);
+
+ from("direct:xml-to-dstu2")
+ .unmarshal(fhirXmlDataFormat)
+ .marshal(fhirXmlDataFormat);
+
+ from("direct:create-dstu2")
+
.to("fhir://create/resource?inBody=resourceAsString&log={{fhir.verbose}}&serverUrl={{fhir.dstu2.url}}&fhirVersion=DSTU2");
+ }
+ }
+}
diff --git
a/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu3Resource.java
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu3Resource.java
new file mode 100644
index 0000000..a7a9614
--- /dev/null
+++
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu3Resource.java
@@ -0,0 +1,74 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import javax.enterprise.context.ApplicationScoped;
+import javax.inject.Inject;
+import javax.ws.rs.Consumes;
+import javax.ws.rs.POST;
+import javax.ws.rs.Path;
+import javax.ws.rs.Produces;
+import javax.ws.rs.core.MediaType;
+import javax.ws.rs.core.Response;
+import java.io.InputStream;
+import java.net.URI;
+import ca.uhn.fhir.rest.api.MethodOutcome;
+import org.apache.camel.ProducerTemplate;
+
+@Path("/dstu3")
+@ApplicationScoped
+public class FhirDstu3Resource {
+
+ @Inject
+ ProducerTemplate producerTemplate;
+
+ @Path("/fhir2json")
+ @POST
+ @Consumes(MediaType.APPLICATION_JSON)
+ @Produces(MediaType.APPLICATION_OCTET_STREAM)
+ public Response fhir2json(String patient) throws Exception {
+ InputStream response =
producerTemplate.requestBody("direct:json-to-dstu3", patient,
InputStream.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(response)
+ .build();
+ }
+
+ @Path("/fhir2xml")
+ @POST
+ @Consumes(MediaType.APPLICATION_XML)
+ @Produces(MediaType.APPLICATION_OCTET_STREAM)
+ public Response fhir2xml(String patient) throws Exception {
+ InputStream response =
producerTemplate.requestBody("direct:xml-to-dstu3", patient, InputStream.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(response)
+ .build();
+ }
+
+ @Path("/createPatient")
+ @POST
+ @Consumes(MediaType.APPLICATION_JSON)
+ @Produces(MediaType.TEXT_PLAIN)
+ public Response createPatient(String patient) throws Exception {
+ MethodOutcome result =
producerTemplate.requestBody("direct:create-dstu3", patient,
MethodOutcome.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(result.getId().getIdPart())
+ .build();
+ }
+}
diff --git
a/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu3RouteBuilder.java
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu3RouteBuilder.java
new file mode 100644
index 0000000..f93b2d2
--- /dev/null
+++
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirDstu3RouteBuilder.java
@@ -0,0 +1,49 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import ca.uhn.fhir.context.FhirVersionEnum;
+import org.apache.camel.builder.RouteBuilder;
+import org.apache.camel.component.fhir.FhirJsonDataFormat;
+import org.apache.camel.component.fhir.FhirXmlDataFormat;
+import org.apache.camel.quarkus.component.fhir.FhirFlags;
+
+public class FhirDstu3RouteBuilder extends RouteBuilder {
+
+ @Override
+ public void configure() {
+ Boolean dstu3 = new FhirFlags.Dstu3Enabled().getAsBoolean();
+ if (dstu3) {
+ FhirJsonDataFormat fhirJsonDataFormat = new FhirJsonDataFormat();
+ fhirJsonDataFormat.setFhirVersion(FhirVersionEnum.DSTU3.name());
+
+ FhirXmlDataFormat fhirXmlDataFormat = new FhirXmlDataFormat();
+ fhirXmlDataFormat.setFhirVersion(FhirVersionEnum.DSTU3.name());
+
+ from("direct:json-to-dstu3")
+ .unmarshal(fhirJsonDataFormat)
+ .marshal(fhirJsonDataFormat);
+
+ from("direct:xml-to-dstu3")
+ .unmarshal(fhirXmlDataFormat)
+ .marshal(fhirXmlDataFormat);
+
+ from("direct:create-dstu3")
+
.to("fhir://create/resource?inBody=resourceAsString&log={{fhir.verbose}}&serverUrl={{fhir.dstu3.url}}&fhirVersion=DSTU3");
+ }
+ }
+}
diff --git
a/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirR4Resource.java
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirR4Resource.java
new file mode 100644
index 0000000..3e914ed
--- /dev/null
+++
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirR4Resource.java
@@ -0,0 +1,74 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import javax.enterprise.context.ApplicationScoped;
+import javax.inject.Inject;
+import javax.ws.rs.Consumes;
+import javax.ws.rs.POST;
+import javax.ws.rs.Path;
+import javax.ws.rs.Produces;
+import javax.ws.rs.core.MediaType;
+import javax.ws.rs.core.Response;
+import java.io.InputStream;
+import java.net.URI;
+import ca.uhn.fhir.rest.api.MethodOutcome;
+import org.apache.camel.ProducerTemplate;
+
+@Path("/r4")
+@ApplicationScoped
+public class FhirR4Resource {
+
+ @Inject
+ ProducerTemplate producerTemplate;
+
+ @Path("/fhir2json")
+ @POST
+ @Consumes(MediaType.APPLICATION_JSON)
+ @Produces(MediaType.APPLICATION_OCTET_STREAM)
+ public Response fhir2json(String patient) throws Exception {
+ InputStream response =
producerTemplate.requestBody("direct:json-to-r4", patient, InputStream.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(response)
+ .build();
+ }
+
+ @Path("/fhir2xml")
+ @POST
+ @Consumes(MediaType.APPLICATION_XML)
+ @Produces(MediaType.APPLICATION_OCTET_STREAM)
+ public Response fhir2xml(String patient) throws Exception {
+ InputStream response =
producerTemplate.requestBody("direct:xml-to-r4", patient, InputStream.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(response)
+ .build();
+ }
+
+ @Path("/createPatient")
+ @POST
+ @Consumes(MediaType.APPLICATION_JSON)
+ @Produces(MediaType.TEXT_PLAIN)
+ public Response createPatient(String patient) throws Exception {
+ MethodOutcome result =
producerTemplate.requestBody("direct:create-r4", patient, MethodOutcome.class);
+ return Response
+ .created(new URI("https://camel.apache.org/";))
+ .entity(result.getId().getIdPart())
+ .build();
+ }
+}
diff --git
a/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirR4RouteBuilder.java
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirR4RouteBuilder.java
new file mode 100644
index 0000000..03641a6
--- /dev/null
+++
b/integration-tests/fhir/src/main/java/org/apache/camel/quarkus/component/fhir/it/FhirR4RouteBuilder.java
@@ -0,0 +1,50 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import ca.uhn.fhir.context.FhirVersionEnum;
+import org.apache.camel.builder.RouteBuilder;
+import org.apache.camel.component.fhir.FhirJsonDataFormat;
+import org.apache.camel.component.fhir.FhirXmlDataFormat;
+import org.apache.camel.quarkus.component.fhir.FhirFlags;
+
+public class FhirR4RouteBuilder extends RouteBuilder {
+
+ @Override
+ public void configure() {
+ Boolean r4 = new FhirFlags.R4Enabled().getAsBoolean();
+
+ if (r4) {
+ FhirJsonDataFormat fhirJsonDataFormat = new FhirJsonDataFormat();
+ fhirJsonDataFormat.setFhirVersion(FhirVersionEnum.R4.name());
+
+ FhirXmlDataFormat fhirXmlDataFormat = new FhirXmlDataFormat();
+ fhirXmlDataFormat.setFhirVersion(FhirVersionEnum.R4.name());
+
+ from("direct:json-to-r4")
+ .unmarshal(fhirJsonDataFormat)
+ .marshal(fhirJsonDataFormat);
+
+ from("direct:xml-to-r4")
+ .unmarshal(fhirXmlDataFormat)
+ .marshal(fhirXmlDataFormat);
+
+ from("direct:create-r4")
+
.to("fhir://create/resource?inBody=resourceAsString&log={{fhir.verbose}}&serverUrl={{fhir.r4.url}}&fhirVersion=R4");
+ }
+ }
+}
diff --git a/integration-tests/fhir/src/main/resources/application.properties
b/integration-tests/fhir/src/main/resources/application.properties
new file mode 100644
index 0000000..06640a2
--- /dev/null
+++ b/integration-tests/fhir/src/main/resources/application.properties
@@ -0,0 +1,40 @@
+## ---------------------------------------------------------------------------
+## Licensed to the Apache Software Foundation (ASF) under one or more
+## contributor license agreements. See the NOTICE file distributed with
+## this work for additional information regarding copyright ownership.
+## The ASF licenses this file to You under the Apache License, Version 2.0
+## (the "License"); you may not use this file except in compliance with
+## the License. You may obtain a copy of the License at
+##
+## http://www.apache.org/licenses/LICENSE-2.0
+##
+## Unless required by applicable law or agreed to in writing, software
+## distributed under the License is distributed on an "AS IS" BASIS,
+## WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+## See the License for the specific language governing permissions and
+## limitations under the License.
+## ---------------------------------------------------------------------------
+#
+# Quarkus
+#
+quarkus.ssl.native=true
+#
+# Quarkus :: Camel
+#
+quarkus.camel.disable-jaxb=false
+#
+# Quarkus :: Camel :: FHIR
+#
+# The HAPI-FHIR library, on which camel-fhir depends on, heavily uses
reflection which affects performance in Quarkus
+# (memory footprint, build time, CPU resources etc...). For the sake of time,
only DSTU3 (which is the default FHIR version)
+# tests are enabled for DSTU3 only by default.
+camel.fhir.enable-dstu2=false
+camel.fhir.enable-dstu3=true
+camel.fhir.enable-r4=false
+#
+# Camel
+#
+fhir.dstu2.url=http://Fhirtest.uhn.ca/baseDstu2
+fhir.dstu3.url=http://Fhirtest.uhn.ca/baseDstu3
+fhir.r4.url=http://Fhirtest.uhn.ca/baseR4
+fhir.verbose=false
\ No newline at end of file
diff --git
a/integration-tests/fhir/src/test/java/org/apache/camel/quarkus/component/fhir/it/FhirIT.java
b/integration-tests/fhir/src/test/java/org/apache/camel/quarkus/component/fhir/it/FhirIT.java
new file mode 100644
index 0000000..102e635
--- /dev/null
+++
b/integration-tests/fhir/src/test/java/org/apache/camel/quarkus/component/fhir/it/FhirIT.java
@@ -0,0 +1,24 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import io.quarkus.test.junit.SubstrateTest;
+
+@SubstrateTest
+class FhirIT extends FhirTest {
+
+}
diff --git
a/integration-tests/fhir/src/test/java/org/apache/camel/quarkus/component/fhir/it/FhirTest.java
b/integration-tests/fhir/src/test/java/org/apache/camel/quarkus/component/fhir/it/FhirTest.java
new file mode 100644
index 0000000..84b0aa8
--- /dev/null
+++
b/integration-tests/fhir/src/test/java/org/apache/camel/quarkus/component/fhir/it/FhirTest.java
@@ -0,0 +1,165 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under one or more
+ * contributor license agreements. See the NOTICE file distributed with
+ * this work for additional information regarding copyright ownership.
+ * The ASF licenses this file to You under the Apache License, Version 2.0
+ * (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.camel.quarkus.component.fhir.it;
+
+import ca.uhn.fhir.context.FhirContext;
+import ca.uhn.fhir.model.dstu2.composite.AddressDt;
+import ca.uhn.fhir.model.dstu2.composite.HumanNameDt;
+import io.quarkus.test.junit.QuarkusTest;
+import io.restassured.RestAssured;
+import io.restassured.http.ContentType;
+import org.apache.camel.quarkus.component.fhir.FhirFlags;
+import org.hl7.fhir.dstu3.model.Address;
+import org.hl7.fhir.dstu3.model.HumanName;
+import org.hl7.fhir.dstu3.model.Patient;
+import org.junit.jupiter.api.Test;
+
+@QuarkusTest
+class FhirTest {
+
+ Boolean dstu2 = new FhirFlags.Dstu2Enabled().getAsBoolean();
+ Boolean dstu3 = new FhirFlags.Dstu3Enabled().getAsBoolean();
+ Boolean r4 = new FhirFlags.R4Enabled().getAsBoolean();
+
+ @Test
+ public void jsonDstu2() {
+ if(!dstu2)
+ return;
+ final ca.uhn.fhir.model.dstu2.resource.Patient patient =
getDstu2Patient();
+ String patientString =
FhirContext.forDstu2().newJsonParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.JSON).body(patientString).post("/dstu2/fhir2json")
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void xmlDstu2() {
+ if(!dstu2)
+ return;
+
+ final ca.uhn.fhir.model.dstu2.resource.Patient patient =
getDstu2Patient();
+ String patientString =
FhirContext.forDstu2().newXmlParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.XML).body(patientString).post("/dstu2/fhir2xml")
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void fhirClientDstu2() {
+ if(!dstu2)
+ return;
+
+ final ca.uhn.fhir.model.dstu2.resource.Patient patient =
getDstu2Patient();
+ String patientString =
FhirContext.forDstu2().newJsonParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.JSON).body(patientString).post("/dstu2/createPatient")
//
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void jsonDstu3() {
+ if(!dstu3)
+ return;
+
+ final Patient patient = getDstu3Patient();
+ String patientString =
FhirContext.forDstu3().newJsonParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.JSON).body(patientString).post("/dstu3/fhir2json")
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void xmlDstu3() {
+ if(!dstu3)
+ return;
+
+ final Patient patient = getDstu3Patient();
+ String patientString =
FhirContext.forDstu3().newXmlParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.XML).body(patientString).post("/dstu3/fhir2xml")
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void fhirClientDstu3() {
+ if(!dstu3)
+ return;
+
+ final Patient patient = getDstu3Patient();
+ String patientString =
FhirContext.forDstu3().newJsonParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.JSON).body(patientString).post("/dstu3/createPatient")
//
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void jsonR4() {
+ if(!r4)
+ return;
+
+ final org.hl7.fhir.r4.model.Patient patient = getR4Patient();
+ String patientString =
FhirContext.forR4().newJsonParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.JSON).body(patientString).post("/r4/fhir2json")
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void xmlR4() {
+ if(!r4)
+ return;
+
+ final org.hl7.fhir.r4.model.Patient patient = getR4Patient();
+ String patientString =
FhirContext.forR4().newXmlParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.XML).body(patientString).post("/r4/fhir2xml")
+ .then().statusCode(201);
+ }
+
+ @Test
+ public void fhirClientR4() {
+ if(!r4)
+ return;
+
+ final org.hl7.fhir.r4.model.Patient patient = getR4Patient();
+ String patientString =
FhirContext.forR4().newJsonParser().encodeResourceToString(patient);
+ RestAssured.given() //
+
.contentType(ContentType.JSON).body(patientString.getBytes()).post("/r4/createPatient")
//
+ .then().statusCode(201);
+ }
+
+ private ca.uhn.fhir.model.dstu2.resource.Patient getDstu2Patient() {
+ return new ca.uhn.fhir.model.dstu2.resource.Patient().addName(new
HumanNameDt().addGiven("Sherlock")
+ .addFamily("Holmes"))
+ .addAddress(new AddressDt().addLine("221b Baker St,
Marylebone, London NW1 6XE, UK"));
+ }
+
+ private Patient getDstu3Patient() {
+ return new Patient().addName(new HumanName().addGiven("Sherlock")
+ .setFamily("Holmes"))
+ .addAddress(new Address().addLine("221b Baker St, Marylebone,
London NW1 6XE, UK"));
+ }
+
+ private org.hl7.fhir.r4.model.Patient getR4Patient() {
+ org.hl7.fhir.r4.model.Patient patient = new
org.hl7.fhir.r4.model.Patient();
+ patient.addAddress().addLine("221b Baker St, Marylebone, London NW1
6XE, UK");
+ patient.addName().addGiven("Sherlock").setFamily("Holmes");
+ return patient;
+ }
+
+
+}
diff --git a/integration-tests/pom.xml b/integration-tests/pom.xml
index 7cd2cb7..d75164b 100644
--- a/integration-tests/pom.xml
+++ b/integration-tests/pom.xml
@@ -91,6 +91,7 @@
<module>aws</module>
<module>bean</module>
<module>csv</module>
+ <module>fhir</module>
<module>infinispan</module>
<module>jdbc</module>
<module>mail</module>
diff --git a/pom.xml b/pom.xml
index 0a76965..3cefd31 100644
--- a/pom.xml
+++ b/pom.xml
@@ -41,6 +41,7 @@
<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
<camel.version>3.0.0-RC3</camel.version>
+ <hapi.version>3.7.0</hapi.version>
<quarkus.version>0.26.1</quarkus.version>
<jetty.version>9.4.18.v20190429</jetty.version>
<xstream.version>1.4.11</xstream.version>
diff --git a/poms/bom-deployment/pom.xml b/poms/bom-deployment/pom.xml
index cb50acf..396b8d8 100644
--- a/poms/bom-deployment/pom.xml
+++ b/poms/bom-deployment/pom.xml
@@ -240,6 +240,11 @@
<artifactId>camel-quarkus-attachments-deployment</artifactId>
<version>${camel-quarkus.version}</version>
</dependency>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-fhir-deployment</artifactId>
+ <version>${camel-quarkus.version}</version>
+ </dependency>
</dependencies>
</dependencyManagement>
diff --git a/poms/bom/pom.xml b/poms/bom/pom.xml
index 8ccb641..d83878a 100644
--- a/poms/bom/pom.xml
+++ b/poms/bom/pom.xml
@@ -121,6 +121,11 @@
</dependency>
<dependency>
<groupId>org.apache.camel</groupId>
+ <artifactId>camel-fhir</artifactId>
+ <version>${camel.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel</groupId>
<artifactId>camel-headersmap</artifactId>
<version>${camel.version}</version>
</dependency>
@@ -339,6 +344,11 @@
</dependency>
<dependency>
<groupId>org.apache.camel.quarkus</groupId>
+ <artifactId>camel-quarkus-fhir</artifactId>
+ <version>${camel-quarkus.version}</version>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.camel.quarkus</groupId>
<artifactId>camel-quarkus-infinispan</artifactId>
<version>${camel-quarkus.version}</version>
</dependency>
@@ -435,6 +445,17 @@
<!-- Other third party dependencies (in alphabetical order by
groupId:artifactId) -->
<dependency>
+ <groupId>ca.uhn.hapi.fhir</groupId>
+ <artifactId>hapi-fhir-structures-r4</artifactId>
+ <version>${hapi.version}</version>
+ <exclusions>
+ <exclusion>
+ <groupId>org.slf4j</groupId>
+ <artifactId>jcl-over-slf4j</artifactId>
+ </exclusion>
+ </exclusions>
+ </dependency>
+ <dependency>
<groupId>org.eclipse.jetty</groupId>
<artifactId>jetty-client</artifactId>
<version>${jetty.version}</version>
