Hi, Mohammad Akhlaghi wrote: > Recently in a build of Gnuastro 0.9 (which uses Gnulib > `v0.1-2539-gd6af24178'), we confronted a crash during the build of > Gnulib's `getgroups.c' (error summary is in P.S.).
A log of the command "make" would be more useful than a log of the command "make -j8", because the latter intermingles the output of different compilations running in parallel. For example, here it looks like the error messages are coming from the compilation of getopt1.c: > /bin/sh ../../libtool --tag=CC --mode=compile /usr/bin/gcc > -DHAVE_CONFIG_H -I. -I../.. -I/usr/local/include -Wall -O3 -pthread > -MT getopt1.lo -MD -MP -MF $depbase.Tpo -c -o getopt1.lo getopt1.c &&\ > mv -f $depbase.Tpo $depbase.Plo > In file included from getgroups.c:22:0: > getgroups.c:33:1: error: conflicting types for ‘rpl_getgroups’ > getgroups (int n _GL_UNUSED, GETGROUPS_T *groups _GL_UNUSED) > ^ > ./unistd.h:1216:1: note: previous declaration of ‘rpl_getgroups’ was here > _GL_FUNCDECL_RPL (getgroups, int, (int n, gid_t *groups)); > ^ > Makefile:2208: recipe for target 'getgroups.lo' failed > As further information, I am also attaching several outputs of the > configuration and build which will hopefully provide much more detailed > information on the host system and build environment. The two > `redirect-*.txt' files are the full outputs of the `./configure' These logs are more interesting: > checking for working getgroups... no On glibc systems, getgroups is expected to work. So, the cause is already to be found during the autoconfiguration. > configure:23138: checking type of array argument to getgroups > configure:23172: /usr/bin/gcc -o conftest -Wall -O3 -pthread > -I/usr/local/include -L/usr/local/lib conftest.c -ltiff -llzma -ljpeg -lwcs > -lcfitsio -lz -lgsl -lgslcblas -lm >&5 > configure:23172: $? = 0 > configure:23172: ./conftest > ./conftest: error while loading shared libraries: libwcs.so.6: cannot open > shared object file: No such file or directory > configure:23172: $? = 127 > configure: program exited with status 127 The error comes from the fact that you have a -L option, the directory in this option was actually used to locate a shared library (libwcs.so.6 in this case), but the runtime linker cannot find this shared library. There are two easy workarounds: (a) set the environment variable LD_LIBRARY_PATH=/usr/local/lib before the configuration, (b) pass LDFLAGS="-L/usr/local/lib -Wl,-rpath,/usr/local/lib". In the case (a) the binaries that you build will only work when LD_LIBRARY_PATH=/usr/local/lib is still set. In the case (b) the binaries will work without this environment variable. Bruno