hwloc is finding weirdness also. I am going to find I have done something stupid, right?
[johnh@comp006 ~]$ lstopo **************************************************************************** * hwloc 1.11.3 has encountered what looks like an error from the operating system. * * Package (P#1 cpuset 0x00fff000) intersects with NUMANode (P#0 cpuset 0x00fc0fff) without inclusion! * Error occurred in topology.c line 1046 * * The following FAQ entry in the hwloc documentation may help: * What should I do when hwloc reports "operating system" warnings? * Otherwise please report this error message to the hwloc user's mailing list, * along with the output+tarball generated by the hwloc-gather-topology script. **************************************************************************** Machine (64GB total) NUMANode L#0 (P#0 32GB) Package L#0 L3 L#0 (15MB) L2 L#0 (256KB) + L1d L#0 (32KB) + L1i L#0 (32KB) + Core L#0 + PU L#0 (P#0) L2 L#1 (256KB) + L1d L#1 (32KB) + L1i L#1 (32KB) + Core L#1 + PU L#1 (P#1) L2 L#2 (256KB) + L1d L#2 (32KB) + L1i L#2 (32KB) + Core L#2 + PU L#2 (P#2) L2 L#3 (256KB) + L1d L#3 (32KB) + L1i L#3 (32KB) + Core L#3 + PU L#3 (P#3) L2 L#4 (256KB) + L1d L#4 (32KB) + L1i L#4 (32KB) + Core L#4 + PU L#4 (P#4) L2 L#5 (256KB) + L1d L#5 (32KB) + L1i L#5 (32KB) + Core L#5 + PU L#5 (P#5) L3 L#1 (15MB) L2 L#6 (256KB) + L1d L#6 (32KB) + L1i L#6 (32KB) + Core L#6 + PU L#6 (P#6) L2 L#7 (256KB) + L1d L#7 (32KB) + L1i L#7 (32KB) + Core L#7 + PU L#7 (P#7) L2 L#8 (256KB) + L1d L#8 (32KB) + L1i L#8 (32KB) + Core L#8 + PU L#8 (P#8) L2 L#9 (256KB) + L1d L#9 (32KB) + L1i L#9 (32KB) + Core L#9 + PU L#9 (P#9) L2 L#10 (256KB) + L1d L#10 (32KB) + L1i L#10 (32KB) + Core L#10 + PU L#10 (P#10) L2 L#11 (256KB) + L1d L#11 (32KB) + L1i L#11 (32KB) + Core L#11 + PU L#11 (P#11) L3 L#2 (15MB) L2 L#12 (256KB) + L1d L#12 (32KB) + L1i L#12 (32KB) + Core L#12 + PU L#12 (P#18) L2 L#13 (256KB) + L1d L#13 (32KB) + L1i L#13 (32KB) + Core L#13 + PU L#13 (P#19) L2 L#14 (256KB) + L1d L#14 (32KB) + L1i L#14 (32KB) + Core L#14 + PU L#14 (P#20) L2 L#15 (256KB) + L1d L#15 (32KB) + L1i L#15 (32KB) + Core L#15 + PU L#15 (P#21) L2 L#16 (256KB) + L1d L#16 (32KB) + L1i L#16 (32KB) + Core L#16 + PU L#16 (P#22) L2 L#17 (256KB) + L1d L#17 (32KB) + L1i L#17 (32KB) + Core L#17 + PU L#17 (P#23) HostBridge L#0 PCIBridge PCI 8086:24f0 PCI 8086:8d62 PCIBridge PCI 102b:0522 GPU L#0 "card0" GPU L#1 "controlD64" PCIBridge PCI 8086:1521 Net L#2 "enp7s0f0" PCI 8086:1521 Net L#3 "enp7s0f1" PCI 8086:8d02 Block(Disk) L#4 "sda" NUMANode L#1 (P#2 32GB) + L3 L#3 (15MB) L2 L#18 (256KB) + L1d L#18 (32KB) + L1i L#18 (32KB) + Core L#18 + PU L#18 (P#12) L2 L#19 (256KB) + L1d L#19 (32KB) + L1i L#19 (32KB) + Core L#19 + PU L#19 (P#13) L2 L#20 (256KB) + L1d L#20 (32KB) + L1i L#20 (32KB) + Core L#20 + PU L#20 (P#14) L2 L#21 (256KB) + L1d L#21 (32KB) + L1i L#21 (32KB) + Core L#21 + PU L#21 (P#15) L2 L#22 (256KB) + L1d L#22 (32KB) + L1i L#22 (32KB) + Core L#22 + PU L#22 (P#16) L2 L#23 (256KB) + L1d L#23 (32KB) + L1i L#23 (32KB) + Core L#23 + PU L#23 (P#17) On 16 December 2016 at 14:36, John Hearns <hear...@googlemail.com> wrote: > This is in the context of Ominpath cards and the hfi1 driver. > In the file pio.c there is a check on the NUMA zones being online > > > > * num_numa = num_online_nodes > <http://lxr.free-electrons.com/ident?v=4.4;i=num_online_nodes>();* > > *1711* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1711>* > /* enforce the expectation that the numas are compact */* > > *1712* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1712>* > for (i <http://lxr.free-electrons.com/ident?v=4.4;i=i> = 0; i > <http://lxr.free-electrons.com/ident?v=4.4;i=i> < num_numa; i > <http://lxr.free-electrons.com/ident?v=4.4;i=i>++) {* > > *1713* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1713>* > if (!node_online > <http://lxr.free-electrons.com/ident?v=4.4;i=node_online>(i > <http://lxr.free-electrons.com/ident?v=4.4;i=i>)) {* > > *1714* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1714>* > dd_dev_err <http://lxr.free-electrons.com/ident?v=4.4;i=dd_dev_err>(dd > <http://lxr.free-electrons.com/ident?v=4.4;i=dd>, "NUMA nodes are not > compact\n");* > > *1715* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1715>* > ret <http://lxr.free-electrons.com/ident?v=4.4;i=ret> = -EINVAL > <http://lxr.free-electrons.com/ident?v=4.4;i=EINVAL>;* > > *1716* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1716>* > goto done <http://lxr.free-electrons.com/ident?v=4.4;i=done>;* > > *1717* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1717>* > }* > > *1718* > <http://lxr.free-electrons.com/source/drivers/staging/rdma/hfi1/pio.c?v=4.4#L1718>* > }* > > > > > On some servers I have I see this weirdness with the NUMA zones: > > (2650-v4 processors, HT is off) > > [root@comp006 ~]# numactl --hardware > > available: 2 nodes (0,2) > > node 0 cpus: 0 1 2 3 4 5 6 7 8 9 10 11 18 19 20 21 22 23 > > node 0 size: 32673 MB > > node 0 free: 29840 MB > > node 2 cpus: 12 13 14 15 16 17 > > node 2 size: 32768 MB > > node 2 free: 31753 MB > > node distances: > > node 0 2 > > 0: 10 20 > > 2: 20 10 > > > > Someone will be along in a minute to explain why. > > I am sure this is a BISO Setting, but which oen is not makign itself clear > to me. > > > > > > >
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