On 16 Feb 2011, at 15:20, Lux, Jim (337C) wrote:

> Aside from how brains are "programmed" (a fascinating question)
> 
> One big difference between biological systems and non-bio is the handling of 
> errors and faults.  Biological systems tend to assume that (many) failures 
> occur and use a strategy of massive redundancy with fuzzy collective action.

<biologist mode on>
Actually, I'd quibble with that statement about redundancy.  On the system 
level, there's very little redundancy in most [animal] organisms.  You only 
have one heart.  You only have one aorta, stomach, oesophagus and so on.  Even 
when some things are paired, the loss of either one (such as severing a carotid 
or femoral artery) can in many cases result in total organism failure.  :-)

Biological systems tend to be plastic and self-healing rather than redundant, I 
would have said.  At the sub-cellular level, redundancy is much more widespread 
of course, with various protein families able to cover for each other, 
resulting in redundant biochemical pathways in many cases, although again not 
all.  Consider the DNA repair disorder xeroderma pigmentosum; it's a failure of 
one particular DNA repair mechanism, and there are seven genetic 
complementation groups for the disease - in other words there are seven 
distinct genes involved in the process, and the failure of any one of them 
results in the failure of the entire process.  There's redundancy in the fact 
that you have two copies of most chromosomes, of course, although you and I, 
being male, are a bit buggered if there's anything wrong with our X chromosome. 
 Ask any haemophiliac.

Plants of course do much better, and do tend to be massively redundant, both at 
the structural level of the whole organism, and also at the genetic level (they 
often have much larger genomes than us, and massively redundant).  Ever tried 
eradicating bindweed from your garden?  That stuff is just impossible to kill.

But as to mental processing, I think one only has to look at what happens in 
brain injury cases like strokes to see that the processing is not redundant; a 
stroke can remove some particular processing ability.  The brain however, has a 
lot of plasticity, especially when young, and other parts of the brain can 
learn to take over the functions.  But I don't think that's quite the same as 
true redundancy; it's like re-programming another set of flash chips to take 
over.

Having said all that, I haven't been actively doing any biology research for 15 
years, so I'm a bit out of touch.

Regards,

Tim



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