You can use NAMD.
http://www.ks.uiuc.edu/Research/vmd/cuda/

Massimiliano

On Wed, Jul 16, 2008 at 9:36 PM, Mark Hahn <[EMAIL PROTECTED]> wrote:

> There has been a lot of talk here lately about cuda, i'm just curious what
>> people here use to benchmark (if at all) GPU's.  I have access to twelve
>>
>
> I don't think the gp-gpu world is that far developed...
>
>  nodes of a larger cluster that have high end nvidia cards and infiniband.
>> It's used for visual processing of CFD.
>> Does anyone have a simple micro benchmark that can be spread across the
>> nodes and crunch some numbers using cuda?  I haven't been able find
>> anything
>> like that or i'm just looking in the wrong place.
>>
>
> cuda concerns itself with a single system, so I can't see why it would
> return different results on different nodes...
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