Perfect!  That seems to have fixed my issues!  Ill be sure to add a post on the 
web describing the procedures we went through to help others!

I do have one other question for you.  If this is out of scope, Ill ask it on 
another forum, but I figured I would start here...

Now I have confirmed that I see NEMA messages on /dev/ttyS1 and I have pps data 
on /dev/pps0.  

I next installed gpsd via apt-get and also chrony via apt-get.  

using cgps, I do have a fix, but at the bottom it flashes pps:false

32","activated":"2018-08-30T19:35:48.716Z","flags":1,"native":0,"bps":9600,"parity":"N","stopbits":1,"cycle":1.00,"mincycle":0.20}]}
{"class":"WATCH","enable":true,"json":true,"nmea":false,"raw":0,"scaled":false,"timing":false,"split24":false,"pps":false}
{

Not sure about that one, so I checked chronyc sources, and get the following:
210 Number of sources = 2
MS Name/IP address         Stratum Poll Reach LastRx Last sample
===============================================================================
#? NMEA                          0   4    17    23   +217ms[ +217ms] +/-  109ms
#? PPS                           0   4     0     -     +0ns[   +0ns] +/-    0ns

Any thoughts as to why chrony and/or gpsd are not seeing the pps signal?

I never told gpsd where to look for the /dev/pps0 device, but I did tell chrony 
to look at:  

# get NMEA data from gpsd over shared memory
refclock SHM 0 offset 0.395 delay 0.2 refid NMEA noselect
# get PPS data from pps-gpio, summarize every 16 seconds, prefer it
refclock PPS /dev/pps0 refid PPS poll 4 prefer


Thanks!

 ---- On Thu, 30 Aug 2018 12:26:35 -0500 Thomas <[email protected]> 
wrote ---- 
 > Robert, 
 > I can't thank you enough for helping me through this.  There is very little 
 > information available online regarding this procedure with this kernel 
 > version... 
 >  
 > First, I made the edit that you recommended..  Now, the BBB reboots and I 
 > can see NEMA data coming from the GPS chip.  However, when  I run PPSTEST on 
 > /dev/pps0, I get the following: 
 >  
 > trying PPS source "/dev/pps0" 
 > found PPS source "/dev/pps0" 
 > ok, found 1 source(s), now start fetching data... 
 > time_pps_fetch() error -1 (Connection timed out) 
 > time_pps_fetch() error -1 (Connection timed out) 
 > time_pps_fetch() error -1 (Connection timed out) 
 > ^C 
 >  
 >  
 > I just measured the P9_12 pin, and I see 2.2v and a 100ms pulse width square 
 > wave coming from the Adafruit GPS receiver.  Any other thoughts as to what 
 > might be causing the timeout? 
 >  
 >  
 >  
 >  
 >  ---- On Thu, 30 Aug 2018 10:28:46 -0500 Robert Nelson 
 > <[email protected]> wrote ----  
 >  > On Thu, Aug 30, 2018 at 10:18 AM Thomas <[email protected]> 
 > wrote:  
 >  > >  
 >  > > I have re-imaged my BBB and made the correction to the typo in my 
 > overlay file.  However, it appears as if I am having the same issue.  When I 
 > install the overlay in the uEnv.txt file and reboot, I am never able to ssh 
 > back into the BBB.  
 >  > >  
 >  > > My file is below for your review.  I can't seem to find any problems 
 > with it, and seem to be stuck again.  Do you have any recommendations on how 
 > to proceed?  
 >  >   
 >  > Your very close, just change one "4" to a "1".. ;)  
 >  >   
 >  >   
 >  > >  
 >  > >         fragment@1 {  
 >  > >                 target = <&am33xx_pinmux>;  
 >  > >                 __overlay__ {  
 >  > >                         bb_uart4_pins: pinmux_bb_uart1_pins {  
 >  >   
 >  > These don't match..  
 >  >   
 >  > >                         pinctrl-0 = <&bb_uart1_pins>;  
 >  >   
 >  > just change:  
 >  >   
 >  > bb_uart1_pins: pinmux_bb_uart1_pins {  
 >  >   
 >  > Then it loads correctly..  
 >  >   
 >  > uboot_overlays: [fdt_buffer=0x60000] ...  
 >  > uboot_overlays: loading /lib/firmware/CLOCK.dtbo ...  
 >  > 1607 bytes read in 377 ms (3.9 KiB/s)  
 >  > uboot_overlays: loading /lib/firmware/BB-BONE-eMMC1-01-00A0.dtbo ...  
 >  > 1440 bytes read in 272 ms (4.9 KiB/s)  
 >  > uboot_overlays: loading /lib/firmware/BB-HDMI-TDA998x-00A0.dtbo ...  
 >  > 5127 bytes read in 149 ms (33.2 KiB/s)  
 >  > uboot_overlays: loading /lib/firmware/BB-ADC-00A0.dtbo ...  
 >  > 711 bytes read in 77 ms (8.8 KiB/s)  
 >  > uboot_overlays: loading /lib/firmware/AM335X-PRU-RPROC-4-14-TI-00A0.dtbo 
 > ...  
 >  > 3513 bytes read in 459 ms (6.8 KiB/s)  
 >  >   
 >  > debian@beaglebone:~$ dmesg | grep pps  
 >  > [    0.617569] pps_core: LinuxPPS API ver. 1 registered  
 >  > [    0.617576] pps_core: Software ver. 5.3.6 - Copyright 2005-2007  
 >  > Rodolfo Giometti <[email protected]>  
 >  > [   40.470657] pps pps0: new PPS source gps_pps.-1  
 >  > [   40.470808] pps pps0: Registered IRQ 115 as PPS source  
 >  >   
 >  >   
 >  > debian@beaglebone:~$ ls /dev/pps0  
 >  > /dev/pps0  
 >  > debian@beaglebone:~$ sudo ppstest /dev/pps0  
 >  > trying PPS source "/dev/pps0"  
 >  > found PPS source "/dev/pps0"  
 >  > ok, found 1 source(s), now start fetching data...  
 >  > time_pps_fetch() error -1 (Connection timed out)  
 >  > ^C  
 >  >   
 >  > (i don't have anything wired, so it'll time out)  
 >  >   
 >  > Regards,  
 >  >   
 >  > --   
 >  > Robert Nelson  
 >  > https://rcn-ee.com/  
 >  >  
 >  
 >  
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