Thanks Mauro and Tim! Cheers
Eduardo -------------------------------- *Eduardo Dalcin <http://eduardo.dalc.in>* Instituto de Pesquisas Jardim Bot?nico do Rio de Janeiro - JBRJ Diretoria de Pesquisas e-mail: edalcin at jbrj.org Trabalho / Work: +55 21 3204 2116 WhatsApp / Telegram: +55 21 98393 3344 Portal de Dados do JBRJ/DIPEQ <http://dados.jbrj.gov.br/> -------------------------------- On Thu, Sep 1, 2016 at 10:32 AM, Mauro Cavalcanti <maurobio at gmail.com> wrote: > Hi, > > Using Python anf the pygbif library, you can do something like this: > > from pygbif import species, occurrences > > taxon_name = "Myrtales" # an order level taxon > taxon_rank = "order" > > key = species.name_backbone(name=taxon_name, rank=taxon_rank)["usageKey"] > n = occurrences.count(taxonKey=key, isGeoreferenced=True) > print n, " record(s) for ", taxon_name > > This script allows to retrieve the number of records at a given taxonomic > level; it can be modified to retrieve the records themselves (or selected > parts of them). > > Hope this helps. > > Salud! > > > 2016-09-01 10:19 GMT-03:00 Eduardo Dalcin <edalcin at jbrj.org>: > >> Hi Tim, Thanks for the prompt reply. Yes, I'm aware of the KEY parameter. >> My comment is that at the filter, for humans that are not aware of those >> "obscure codes", still no way to select upper taxonomic ranks but species, >> through scientific name. Am I right? >> >> Eduardo >> >> >> -------------------------------- >> *Eduardo Dalcin <http://eduardo.dalc.in>* >> Instituto de Pesquisas Jardim Bot?nico do Rio de Janeiro - JBRJ >> Diretoria de Pesquisas >> e-mail: edalcin at jbrj.org >> Trabalho / Work: +55 21 3204 2116 >> WhatsApp / Telegram: +55 21 98393 3344 >> Portal de Dados do JBRJ/DIPEQ <http://dados.jbrj.gov.br/> >> -------------------------------- >> >> On Thu, Sep 1, 2016 at 10:12 AM, Tim Robertson <trobertson at gbif.org> >> wrote: >> >>> Hi Eduardo, >>> >>> I hope you are well. I?m not sure I understand your comment I?m afraid. >>> >>> Taxonomic filters have been working in GBIF since 2007 and they can be >>> combined with any other filters. They are the most used search filters, >>> which all species pages link to. >>> >>> Plants: http://www.gbif.org/occurrence/search?TAXON_KEY=6 or >>> http://api.gbif.org/v1/occurrence/search?TAXON_KEY=6 >>> Animals: http://www.gbif.org/occurrence/search?TAXON_KEY=1 or >>> http://api.gbif.org/v1/occurrence/search?TAXON_KEY=1 >>> >>> I presume you mean something else though - can you please explain and >>> I?ll try and help? >>> >>> Thanks, >>> Tim >>> >>> >>> >>> From: Eduardo Dalcin <edalcin at jbrj.org> >>> Date: Thursday 1 September 2016 at 14:55 >>> To: Tim Robertson <trobertson at gbif.org> >>> Cc: "api-users at lists.gbif.org" <api-users at lists.gbif.org> >>> Subject: Re: [API-users] Changes in GBIF.org and API >>> >>> Congrats folks! Great job! >>> >>> Still no way to separate plants of animals, or I missing something? >>> >>> Cheers >>> >>> Eduardo >>> >>> >>> -------------------------------- >>> *Eduardo Dalcin <http://eduardo.dalc.in>* >>> Instituto de Pesquisas Jardim Bot?nico do Rio de Janeiro - JBRJ >>> Diretoria de Pesquisas >>> e-mail: edalcin at jbrj.org >>> Trabalho / Work: +55 21 3204 2116 >>> WhatsApp / Telegram: +55 21 98393 3344 >>> Portal de Dados do JBRJ/DIPEQ <http://dados.jbrj.gov.br/> >>> -------------------------------- >>> >>> On Thu, Sep 1, 2016 at 8:55 AM, Tim Robertson <trobertson at gbif.org> >>> wrote: >>> >>>> Hi folks, >>>> >>>> I am very happy to let you know that a new release of GBIF.org went >>>> online at lunchtime today with the following enhancements: >>>> >>>> *Occurrence search (http://www.gbif.org/occurrence/search >>>> <http://www.gbif.org/occurrence/search>):* >>>> >>>> - New locality based filters: >>>> - locality, province/state and water body >>>> - These are not interpreted terms, but allow search based on >>>> what publishers state >>>> - http://www.gbif.org/occurrence/search?STATE_PROVINCE=California >>>> >>>> - http://www.gbif.org/occurrence/search?WATER_BODY=AMAZONAS+BA >>>> SIN%2C+RIO+JURUA >>>> - A new organismID filter >>>> - http://www.gbif.org/occurrence/search?ORGANISM_ID=100 >>>> - Publishing protocol filter >>>> - http://www.gbif.org/occurrence/search?PROTOCOL=TAPIR >>>> - License filter and facet: >>>> - http://www.gbif.org/occurrence/search?license=CC_BY_4_0 >>>> - The occurrence API supports all the filters mentioned above with >>>> the addition of also allowing search by publishing organisation >>>> >>>> *Occurrence downloads*: >>>> >>>> - The rights.txt file: has been changed to list all the licenses of >>>> datasets included in that download. >>>> - DwC-A based downloads and the Datacite metada (DOIs) use the most >>>> restrictive license of the datasets included in the download defaulting >>>> to >>>> CC-BY. >>>> - The CSV downloads contain a new column ?*License*?. >>>> >>>> The *Dataset search page* now supports faceted navigation by license: >>>> http://www.gbif.org/dataset/search?license=CC_BY_4_0 >>>> >>>> In the release, we have temporarily broken the ?*repatriation*? filter >>>> which is being re-enabled now, and will be online again tomorrow. Sorry >>>> about this partial outage of that search term. >>>> >>>> Many thanks, >>>> Tim >>>> >>>> >>>> >>>> _______________________________________________ >>>> API-users mailing list >>>> API-users at lists.gbif.org >>>> http://lists.gbif.org/mailman/listinfo/api-users >>>> >>>> >>> >> >> _______________________________________________ >> API-users mailing list >> API-users at lists.gbif.org >> http://lists.gbif.org/mailman/listinfo/api-users >> >> > > > -- > Dr. Mauro J. Cavalcanti > E-mail: maurobio at gmail.com > Web: http://sites.google.com/site/maurobio > -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.gbif.org/pipermail/api-users/attachments/20160901/1ac28bde/attachment.html>
